Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O16
(1025 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.1
07_01_0974 + 8211602-8212051 30 2.6
05_01_0137 + 917533-917814,918080-918352 30 2.6
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 30 2.6
01_05_0717 - 24571967-24572881 30 3.4
08_02_1310 - 26037025-26038074 29 4.5
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 29 4.5
09_04_0080 + 14393797-14393894,14395100-14395202,14395307-143954... 29 6.0
09_02_0468 - 9608922-9610061 29 6.0
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 6.0
02_01_0381 - 2764331-2764342,2768966-2769907 29 6.0
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 29 7.9
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 29 7.9
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 29 7.9
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 767 PPPPXXPXGGGGGG 808
PPPP P GGGGGG
Sbjct: 70 PPPPSYPSGGGGGG 83
>07_01_0974 + 8211602-8212051
Length = 149
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 716 PPPXXXXFXFXKKKXKXPPPPXXPXGGGGGG 808
PPP F + PPPP P GGGG G
Sbjct: 37 PPPLVQQFYYYS-----PPPPSSPVGGGGTG 62
>05_01_0137 + 917533-917814,918080-918352
Length = 184
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 717 PPPXFXFFXFXKKXKXXPPPPXXXXGGG 800
PPP F F ++ PPPP GGG
Sbjct: 71 PPPSFRRRSFCRRCTPPPPPPPAAGGGG 98
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 30.3 bits (65), Expect = 2.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 807 PPPPPPXGXXGGGGXF 760
PPPPPP G GGG +
Sbjct: 13 PPPPPPFGRGGGGAGY 28
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 767 PPPPXXPXGGGGGGXXXXXXXXXXXXPP 850
PPPP P G GGGG PP
Sbjct: 12 PPPPPPPFGRGGGGAGYPRGHKQLYAPP 39
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 808 PPPPPPXXXXGGGG 767
PPPPPP GGGG
Sbjct: 12 PPPPPPPFGRGGGG 25
>01_05_0717 - 24571967-24572881
Length = 304
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 801 PPPPXGXXGGGGXFXFF 751
PPPP G GGGG F F
Sbjct: 14 PPPPRGGGGGGGEFDHF 30
>08_02_1310 - 26037025-26038074
Length = 349
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 807 PPPPPPXGXXGGGG 766
PPPPPP GGGG
Sbjct: 152 PPPPPPPSSGGGGG 165
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 767 PPPPXXPXGGGGGG 808
PPPP P GGGGG
Sbjct: 152 PPPPPPPSSGGGGG 165
>02_03_0273 +
17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 29.5 bits (63), Expect = 4.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 807 PPPPPPXGXXGGGG 766
PPPPPP GGGG
Sbjct: 16 PPPPPPHAAAGGGG 29
>09_04_0080 +
14393797-14393894,14395100-14395202,14395307-14395427,
14396208-14396287,14396702-14396878,14396992-14397215,
14397881-14397887,14398807-14398888,14399188-14399384
Length = 362
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 804 PPPPPXGXXGGGG 766
PPPPP G GGGG
Sbjct: 344 PPPPPAGDEGGGG 356
>09_02_0468 - 9608922-9610061
Length = 379
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 717 PPPXFXFFXFXKKXKXXPPPPXXXXGGGGGG 809
P P F K PPPP GGGGG
Sbjct: 332 PKPSSCRFQCVADHKPPPPPPATTSNGGGGG 362
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 808 PPPPPPXXXXGGGG 767
PPPPPP GGGG
Sbjct: 64 PPPPPPARSGGGGG 77
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 29.1 bits (62), Expect = 6.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 767 PPPPXXPXGGGGGG 808
PPPP P GGGGG
Sbjct: 67 PPPPNQPSAGGGGG 80
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 807 PPPPPPXGXXGGGG 766
PPPPP G GGGG
Sbjct: 4 PPPPPQAGVAGGGG 17
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 807 PPPPPPXGXXGGGG 766
PPPPPP G GG G
Sbjct: 217 PPPPPPCGCSGGHG 230
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 808 PPPPPPXXXXGGGGXF 761
PPPPPP GGG F
Sbjct: 64 PPPPPPFPKGGGGSSF 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,829,305
Number of Sequences: 37544
Number of extensions: 542559
Number of successful extensions: 7317
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3718
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3012716568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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