Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O16
         (1025 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical ...    29   4.1  
U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical pr...    29   7.1  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    28   9.4  
AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (...    28   9.4  

>AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical
           protein C02E7.7 protein.
          Length = 66

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 807 PPPPPPXGXXGGGGXF 760
           PPPPP  G  GGGG +
Sbjct: 32  PPPPPACGCGGGGGGY 47



 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 808 PPPPPPXXXXGGGG 767
           PPPPPP    GGGG
Sbjct: 31  PPPPPPACGCGGGG 44



 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 768 PPPPXXXXGGGGGG 809
           PPPP    GGGGGG
Sbjct: 33  PPPPACGCGGGGGG 46


>U55366-2|AAA97981.1|  156|Caenorhabditis elegans Hypothetical
           protein F41F3.3 protein.
          Length = 156

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 807 PPPPPPXGXXGGGG 766
           PPPP P G  GGGG
Sbjct: 33  PPPPSPCGCGGGGG 46


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 807 PPPPPPXGXXGGGG 766
           PPPPPP G   GGG
Sbjct: 31  PPPPPPCGGGCGGG 44


>AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (grd
           related) protein 5 protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -3

Query: 855 FXGGXXXXXXXXXXXXPPPPPPXGXXGGG 769
           F GG            PPPPPP    GGG
Sbjct: 18  FFGGGSSCGCSAPPACPPPPPPSPCGGGG 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,040,658
Number of Sequences: 27780
Number of extensions: 240582
Number of successful extensions: 2490
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2709719642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)