Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O15
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ...    31   0.83 
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ...    31   0.83 
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou...    31   0.83 
U70858-5|AAB09179.2|  294|Caenorhabditis elegans Serpentine rece...    30   1.9  
Z70780-5|CAD91633.1|  779|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z70780-4|CAD54137.2|  786|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z70780-3|CAA94828.2|  828|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    29   5.8  

>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
           receptor potential)channel family protein 1, isoform b
           protein.
          Length = 1047

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 345 TANVFSSCTIKLLTISKSLFLITSPFSMAQYKPHNVT*W 229
           ++NVFSS     LT+  SLF IT P      + H +T W
Sbjct: 617 SSNVFSSIADSYLTLLWSLFSITKPEDTDVVENHKITQW 655


>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
           receptor potential)channel family protein 1, isoform a
           protein.
          Length = 1027

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 345 TANVFSSCTIKLLTISKSLFLITSPFSMAQYKPHNVT*W 229
           ++NVFSS     LT+  SLF IT P      + H +T W
Sbjct: 597 SSNVFSSIADSYLTLLWSLFSITKPEDTDVVENHKITQW 635


>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
           cation channel proteinprotein.
          Length = 1027

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 345 TANVFSSCTIKLLTISKSLFLITSPFSMAQYKPHNVT*W 229
           ++NVFSS     LT+  SLF IT P      + H +T W
Sbjct: 597 SSNVFSSIADSYLTLLWSLFSITKPEDTDVVENHKITQW 635


>U70858-5|AAB09179.2|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein34 protein.
          Length = 294

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 405 RATLVAVPFSQSISYKPSSVTANVFSSCTIKLLTISKSLFLITSPFS 265
           R   V  PFS +  + P +    +FS  T+ LL ++  LF+I   FS
Sbjct: 101 RFIAVFKPFSYNTVFNPRTTRVIIFSVITLSLLIVNCWLFIIDCRFS 147


>Z70780-5|CAD91633.1|  779|Caenorhabditis elegans Hypothetical
           protein F46B6.5c protein.
          Length = 779

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +2

Query: 272 GEVIKNKDLDIVNNFIVHEEKTFAVTEEGLYDIDCENGTATRV 400
           GEV++N++  + N  I+ +E+    TEEGL + D E   + R+
Sbjct: 327 GEVLENREPHLTNASIIVQEEVVVETEEGLVE-DGEIEASNRI 368


>Z70780-4|CAD54137.2|  786|Caenorhabditis elegans Hypothetical
           protein F46B6.5b protein.
          Length = 786

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +2

Query: 272 GEVIKNKDLDIVNNFIVHEEKTFAVTEEGLYDIDCENGTATRV 400
           GEV++N++  + N  I+ +E+    TEEGL + D E   + R+
Sbjct: 327 GEVLENREPHLTNASIIVQEEVVVETEEGLVE-DGEIEASNRI 368


>Z70780-3|CAA94828.2|  828|Caenorhabditis elegans Hypothetical
           protein F46B6.5a protein.
          Length = 828

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +2

Query: 272 GEVIKNKDLDIVNNFIVHEEKTFAVTEEGLYDIDCENGTATRV 400
           GEV++N++  + N  I+ +E+    TEEGL + D E   + R+
Sbjct: 327 GEVLENREPHLTNASIIVQEEVVVETEEGLVE-DGEIEASNRI 368


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 483 RLRPIVSYPSLXFVPXXVDPTLSVFVLIRVCY 578
           +L  ++++ SL F+P  V   +SVF+L R+ Y
Sbjct: 697 KLEGVMAFNSLIFLPSCVSHLVSVFILYRLPY 728


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,205,150
Number of Sequences: 27780
Number of extensions: 209245
Number of successful extensions: 575
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)