Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O13
         (1429 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    28   0.57 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   7.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   9.3  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 28.3 bits (60), Expect = 0.57
 Identities = 15/54 (27%), Positives = 20/54 (37%)
 Frame = +3

Query: 1218 LPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXPXPPP 1379
            + PN  ++    P   +  P   +P  P   P  PG  P       P  P PPP
Sbjct: 62   IAPNPFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMG---PNGPLPPP 112


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +1

Query: 820  YLLXXXXRHSGXPPXIXGPHLPXPPRXP 903
            YL+      +G      GPH P PP  P
Sbjct: 1250 YLMGSTQAIAGLAQGSMGPHTPPPPNTP 1277


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 9.3
 Identities = 16/70 (22%), Positives = 21/70 (30%)
 Frame = +3

Query: 1188 PAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXP 1367
            P P       +PP          R+P        P +P     P G      +   P  P
Sbjct: 533  PPPPGGAVLNIPPQFLPPPLNLLRAPF------FPLNPAQLRFPAGFPNLPNAQPPPAPP 586

Query: 1368 XPPPXXQXPT 1397
             PPP    P+
Sbjct: 587  PPPPMGPPPS 596


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,565
Number of Sequences: 2352
Number of extensions: 4529
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 165809160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)