Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O13
(1429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.37
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.86
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 2.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 2.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 2.6
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 30 3.5
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 30 3.5
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 30 3.5
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 30 3.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 4.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 4.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 4.6
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 4.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 8.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 8.1
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.5 bits (73), Expect = 0.37
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +3
Query: 1221 PPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXPXPPP 1379
PP S +P P PP + +P PLP P S S P PPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +3
Query: 1236 SSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPT---XPXPPP 1379
S+ S SP PP P S P+PP P PT P PPP
Sbjct: 1329 STSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP 1379
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.86
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +3
Query: 1221 PPNXKSSXXXSPRSPLVXPPXXLPXSPXXXP--LPPGXRPXXRSXSXPTXPXPPP 1379
PP + PRSP P P SP P PP P + P+ P PPP
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPS-PIPPP 194
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/83 (27%), Positives = 26/83 (31%)
Frame = +3
Query: 1146 RXXXIDAXRLXSXAPAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPG 1325
R ID RL PA A P ++ + P PP L SP P
Sbjct: 285 RDPEIDEDRLLDILPADDQIPEASEPTEAEADAPTTFILPPPPPPMKLDPSPQPAATPVE 344
Query: 1326 XRPXXRSXSXPTXPXPPPXXQXP 1394
S P P PPP P
Sbjct: 345 ITEIPPIISPPAPPPPPPPPPPP 367
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 30.7 bits (66), Expect = 2.6
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +3
Query: 1194 PXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXL-PXSPXXXPLPPGXRPXXRSXSXPTXPX 1370
P + A PP S +P P P + P S P PP S PT P
Sbjct: 481 PLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPP 540
Query: 1371 PPP 1379
PPP
Sbjct: 541 PPP 543
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.6
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +3
Query: 1188 PAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXP 1367
P P S +PP + +PR P PP P P PPG P P P
Sbjct: 264 PPPPPSV-TPMPPPMPPTPGMTPRPP---PPPSSGMWPPPPPPPPGRTPG--PPGMPGMP 317
Query: 1368 XPPP 1379
PPP
Sbjct: 318 PPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 2.6
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = +3
Query: 1188 PAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXP 1367
P P S +PP + +PR P PP P P PPG P P P
Sbjct: 274 PPPPPSV-TPMPPPMPPTPGMTPRPP---PPPSSGMWPPPPPPPPGRTPG--PPGMPGMP 327
Query: 1368 XPPP 1379
PPP
Sbjct: 328 PPPP 331
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 30.3 bits (65), Expect = 3.5
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 1179 SXAPAPXTSXXAXLPPNXKSSXXXS-PRSPLVXPPXXLPXSPXX---XPLPPGXRPXXRS 1346
S P P ++ + +PP KS+ P +P P +P +P +PP + S
Sbjct: 308 SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPS 367
Query: 1347 XSXPTXPXPPPXXQXPT 1397
+ PT P PT
Sbjct: 368 EAPPTPRSAAPSDVPPT 384
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 30.3 bits (65), Expect = 3.5
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 1179 SXAPAPXTSXXAXLPPNXKSSXXXS-PRSPLVXPPXXLPXSPXX---XPLPPGXRPXXRS 1346
S P P ++ + +PP KS+ P +P P +P +P +PP + S
Sbjct: 258 SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPS 317
Query: 1347 XSXPTXPXPPPXXQXPT 1397
+ PT P PT
Sbjct: 318 EAPPTPRSAAPSDVPPT 334
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 30.3 bits (65), Expect = 3.5
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 1179 SXAPAPXTSXXAXLPPNXKSSXXXS-PRSPLVXPPXXLPXSPXX---XPLPPGXRPXXRS 1346
S P P ++ + +PP KS+ P +P P +P +P +PP + S
Sbjct: 308 SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPS 367
Query: 1347 XSXPTXPXPPPXXQXPT 1397
+ PT P PT
Sbjct: 368 EAPPTPRSAAPSDVPPT 384
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 30.3 bits (65), Expect = 3.5
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +3
Query: 1179 SXAPAPXTSXXAXLPPNXKSSXXXS-PRSPLVXPPXXLPXSPXX---XPLPPGXRPXXRS 1346
S P P ++ + +PP KS+ P +P P +P +P +PP + S
Sbjct: 308 SVPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPS 367
Query: 1347 XSXPTXPXPPPXXQXPT 1397
+ PT P PT
Sbjct: 368 EAPPTPRSAAPSDVPPT 384
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +3
Query: 1170 RLXSXAPAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRP 1334
R+ AP P PP P P+ PP P P P PP RP
Sbjct: 38 RMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPP-PPMPCPPPPPPMPRP 91
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 1311 PLPPGXRPXXRSXSXPTXPXPPPXXQXPT 1397
P PP P S PT P PPP Q P+
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPPAQQKPS 184
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 1311 PLPPGXRPXXRSXSXPTXPXPPPXXQXPT 1397
P PP P S PT P PPP Q P+
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPPAQQKPS 184
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical protein
C27H5.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -1
Query: 1393 GXXXXGGGLGXVGXEXDRXXGRXPGGRGLXXGLXGXXXGGXTSGERG 1253
G GG G G R G GGRG G G GG G+RG
Sbjct: 314 GRGGFGGDRGGYGGGGGR--GGFDGGRGGGGGFRGGDRGGFRGGDRG 358
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 6.1
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +3
Query: 1179 SXAPAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXP 1358
S +P P + + PP S SP P P P PP P S P
Sbjct: 252 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRGSPP 308
Query: 1359 TXPXPPP 1379
T PPP
Sbjct: 309 TGSLPPP 315
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 1251 SPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXPXPPPXXQXPT 1397
SP P P P P G P R+ S P P PPP PT
Sbjct: 263 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPPPRGSPPT 309
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 6.1
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +3
Query: 1179 SXAPAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXP 1358
S +P P + + PP S SP P P P PP P S P
Sbjct: 273 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRGSPP 329
Query: 1359 TXPXPPP 1379
T PPP
Sbjct: 330 TGSLPPP 336
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 1251 SPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXPXPPPXXQXPT 1397
SP P P P P G P R+ S P P PPP PT
Sbjct: 284 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPPPRGSPPT 330
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 6.1
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +3
Query: 1179 SXAPAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXP 1358
S +P P + + PP S SP P P P PP P S P
Sbjct: 258 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRGSPP 314
Query: 1359 TXPXPPP 1379
T PPP
Sbjct: 315 TGSLPPP 321
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 1251 SPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXPXPPPXXQXPT 1397
SP P P P P G P R+ S P P PPP PT
Sbjct: 269 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPPPRGSPPT 315
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical protein
F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 1254 PRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXPTXPXPPPXXQXP 1394
P +PL PP P+P P + + P P PPP P
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSP 131
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +3
Query: 1179 SXAPAPXTSXXAXLPPNXKSSXXXSPRSPLVXPPXXLPXSPXXXPLPPGXRPXXRSXSXP 1358
S P T A PP+ + SP+ P P PLPP P P
Sbjct: 462 SSTTPPTTPKPAPPPPSRIPNPSPSPQ-----PAEVSKSPPPPPPLPPIATPSSVPPPPP 516
Query: 1359 TXPXPPP 1379
P PPP
Sbjct: 517 PPPPPPP 523
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,805,873
Number of Sequences: 27780
Number of extensions: 118067
Number of successful extensions: 656
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4069011098
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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