Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O12
         (1124 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    65   1e-10
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    62   7e-10
U41109-10|AAB37042.2|  169|Caenorhabditis elegans Hypothetical p...    34   0.16 

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = +3

Query: 168 IAKEXASKNITMRGNVXKTTXEXEEEYPVAXWILALFXFVVCGSAVFXIIQSIRL 332
           +A +  SKN+  RGNV K+    E++YP A W++ LF FVVCGSAVF II+ +++
Sbjct: 9   LANKQFSKNVNNRGNVAKSLKPAEDKYPAAPWLIGLFVFVVCGSAVFEIIRYVKM 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 62.1 bits (144), Expect = 7e-10
 Identities = 25/55 (45%), Positives = 37/55 (67%)
 Frame = +3

Query: 168 IAKEXASKNITMRGNVXKTTXEXEEEYPVAXWILALFXFVVCGSAVFXIIQSIRL 332
           +A    SKN+T RGNV K     E ++P + W++ LF FVVCGSA+F +I+ I++
Sbjct: 9   VANAQFSKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63


>U41109-10|AAB37042.2|  169|Caenorhabditis elegans Hypothetical
           protein F52E1.9 protein.
          Length = 169

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 215 YIPPHCDVFTGXLLXDTHXLLTAPFCFLIKYISQFNNK 102
           Y+ PHCD     L   T+ LLT PFC+    I  +N K
Sbjct: 64  YVCPHCD--EQFLFHSTNGLLTCPFCYTSIAIGTYNRK 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,519,204
Number of Sequences: 27780
Number of extensions: 146277
Number of successful extensions: 223
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3036427278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)