Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O09
(846 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 128 4e-30
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 123 2e-28
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 116 2e-26
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 110 1e-24
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 69 4e-12
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 52 8e-07
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64... 28 8.1
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 128 bits (310), Expect = 4e-30
Identities = 57/105 (54%), Positives = 70/105 (66%)
Frame = +3
Query: 387 VVQFTVKHEQDXDCGGGYLKVFDCKLEXXDMHGETPYEIMFGPDICGPGTXKVHVIFXYX 566
V+QF+VKHEQ DCGGGY+K+ ++ GETPY IMFGPDICG T KVH I
Sbjct: 109 VLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKN 168
Query: 567 GKXHLIKKDIRCKDDVXTHLYTLIVKPXNXYEXLIDHXXXXSGDL 701
GK HLIKKD+ CK D TH+YTLI++P Y LID+ +G +
Sbjct: 169 GKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSI 213
Score = 58.4 bits (135), Expect = 7e-09
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 12/83 (14%)
Frame = +2
Query: 173 VFFEEXFPDDSWESXWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLKT 316
VFF+E F DD WE WV SE G++ T+GK++ D +D G++T
Sbjct: 27 VFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQT 85
Query: 317 SEDARFYALSRKFKPFSNEGKPL 385
SED RFYA+S K+ FS++ K L
Sbjct: 86 SEDYRFYAISAKYPEFSSKDKTL 108
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 123 bits (297), Expect = 2e-28
Identities = 55/105 (52%), Positives = 69/105 (65%)
Frame = +3
Query: 387 VVQFTVKHEQDXDCGGGYLKVFDCKLEXXDMHGETPYEIMFGPDICGPGTXKVHVIFXYX 566
V+QF+VKHEQ DCGGGY+K+ ++ G+TPY IMFGPDICG T KVH IF
Sbjct: 102 VLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKN 161
Query: 567 GKXHLIKKDIRCKDDVXTHLYTLIVKPXNXYEXLIDHXXXXSGDL 701
K HLIKKD+ C+ D +H+YTLI+ P Y LID+ SG +
Sbjct: 162 DKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSI 206
Score = 71.7 bits (168), Expect = 7e-13
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +2
Query: 173 VFFEEXFPDDSWESXWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALS 346
VFF+E F +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+S
Sbjct: 31 VFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAIS 88
Query: 347 RKFKPFSNEGKPL 385
++ FSN+ K L
Sbjct: 89 AEYPEFSNKDKTL 101
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 116 bits (279), Expect = 2e-26
Identities = 47/105 (44%), Positives = 70/105 (66%)
Frame = +3
Query: 387 VVQFTVKHEQDXDCGGGYLKVFDCKLEXXDMHGETPYEIMFGPDICGPGTXKVHVIFXYX 566
V+Q+++K EQD +CGGGY+K+ + G+TPY +MFGPDICG T K+H+I Y
Sbjct: 100 VLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDICGTQTKKLHLILSYQ 159
Query: 567 GKXHLIKKDIRCKDDVXTHLYTLIVKPXNXYEXLIDHXXXXSGDL 701
G+ + IKKD++C+ D TH+YT I++P Y L+D+ SG +
Sbjct: 160 GQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSM 204
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = +2
Query: 173 VFFEEXFPDDSWESXWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALS 346
V FEE F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+S
Sbjct: 29 VIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAIS 86
Query: 347 RKFKPFSNEGKPL 385
K FSN+G+ L
Sbjct: 87 AKIPEFSNKGRTL 99
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 110 bits (265), Expect = 1e-24
Identities = 46/105 (43%), Positives = 66/105 (62%)
Frame = +3
Query: 387 VVQFTVKHEQDXDCGGGYLKVFDCKLEXXDMHGETPYEIMFGPDICGPGTXKVHVIFXYX 566
VVQ+++K EQD +CGG Y+K+ + G+TPY MFGPDICG T K+H+I Y
Sbjct: 100 VVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPDICGDQTKKLHLILSYQ 159
Query: 567 GKXHLIKKDIRCKDDVXTHLYTLIVKPXNXYEXLIDHXXXXSGDL 701
G+ + IKKD++C+ D TH YT I++P Y L+D+ G +
Sbjct: 160 GQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSM 204
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 173 VFFEEXFPDDSWESXWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALS 346
V FEE F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+ +A+S
Sbjct: 29 VIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKHFAIS 86
Query: 347 RKFKPFSNEGKPL 385
KF FSN+ + L
Sbjct: 87 AKFPEFSNKNRTL 99
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 69.3 bits (162), Expect = 4e-12
Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Frame = +3
Query: 387 VVQFTVKHEQDXDCGGGYLKVF---DCKLEXXDMHGETPYEIMFGPDICGPGTXKVHVIF 557
V+QF V+ + +CGG YLK D + + ETPY IMFGPD CG T KVH I
Sbjct: 91 VLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCG-STNKVHFIL 149
Query: 558 XY----XGK--XHLIKKDIRCKDDVXTHLYTLIVKPXNXYEXLID 674
+ GK H +K D +H+YT I+KP N L+D
Sbjct: 150 KHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVD 194
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 51.6 bits (118), Expect = 8e-07
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 567 GKXHLIKKDIRCKDDVXTHLYTLIVKPXNXYEXLIDHXXXXSGDL 701
G HLIKKD+ C+ D TH+YTLI++P Y LID+ +G +
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSI 559
>06_01_0081 +
646100-646346,646432-646848,647067-647170,648152-648352,
649088-649798,649944-650674,650942-651017,651096-651182,
651429-651517,651917-651973,652402-652510,652590-652649,
652835-652919,653178-653242,653694-653753,653869-653913,
654697-654800,654877-655099
Length = 1156
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 336 MLSPVSSNRSVMRVNPWVVQFTVKHEQDXDCGGGYLKVFDCKLEXXDMHGETPY 497
+L S++R+ + V+PW++ F + + ++ ++ KL+ D+ PY
Sbjct: 702 LLDTCSNDRNSVDVSPWILNFCLVKKWSIGRCNRFMHGYEDKLQIEDVCSYVPY 755
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,226,195
Number of Sequences: 37544
Number of extensions: 309646
Number of successful extensions: 552
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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