Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O09
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin pr...   134   6e-32
AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin ...   134   6e-32
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    76   3e-14
Z75712-10|CAB00039.2|  332|Caenorhabditis elegans Hypothetical p...    28   9.6  

>X59589-1|CAA42159.1|  395|Caenorhabditis elegans calreticulin
           protein.
          Length = 395

 Score =  134 bits (325), Expect = 6e-32
 Identities = 61/106 (57%), Positives = 72/106 (67%)
 Frame = +3

Query: 387 VVQFTVKHEQDXDCGGGYLKVFDCKLEXXDMHGETPYEIMFGPDICGPGTXKVHVIFXYX 566
           V+Q+TVKHEQ  DCGGGY+KV     +  D HGETPY +MFGPDICGP T +VHVI  Y 
Sbjct: 88  VIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP-TRRVHVILNYK 146

Query: 567 GKXHLIKKDIRCKDDVXTHLYTLIVKPXNXYEXLIDHXXXXSGDLK 704
           G+  LIKK+I CK D  THLYTLI+   N YE  ID     +G L+
Sbjct: 147 GENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLE 192



 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 INCXVFFEEXFPDDSWESXWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 340
           ++  V+F+E F D SWE  WV S+H   +FG FKL+AGKFF     D+G++TS+DA+FY+
Sbjct: 13  VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71

Query: 341 LSRKF-KPFSNEGKPL 385
            + KF K FSN+GK L
Sbjct: 72  RAAKFDKDFSNKGKTL 87


>AF125963-7|AAD14746.1|  395|Caenorhabditis elegans Calreticulin
           protein 1 protein.
          Length = 395

 Score =  134 bits (325), Expect = 6e-32
 Identities = 61/106 (57%), Positives = 72/106 (67%)
 Frame = +3

Query: 387 VVQFTVKHEQDXDCGGGYLKVFDCKLEXXDMHGETPYEIMFGPDICGPGTXKVHVIFXYX 566
           V+Q+TVKHEQ  DCGGGY+KV     +  D HGETPY +MFGPDICGP T +VHVI  Y 
Sbjct: 88  VIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP-TRRVHVILNYK 146

Query: 567 GKXHLIKKDIRCKDDVXTHLYTLIVKPXNXYEXLIDHXXXXSGDLK 704
           G+  LIKK+I CK D  THLYTLI+   N YE  ID     +G L+
Sbjct: 147 GENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLE 192



 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +2

Query: 161 INCXVFFEEXFPDDSWESXWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 340
           ++  V+F+E F D SWE  WV S+H   +FG FKL+AGKFF     D+G++TS+DA+FY+
Sbjct: 13  VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71

Query: 341 LSRKF-KPFSNEGKPL 385
            + KF K FSN+GK L
Sbjct: 72  RAAKFDKDFSNKGKTL 87


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
 Frame = +3

Query: 378 NPWVVQFTVKHEQDXDCGGGYLKVFD--CKLEXXDMHGETPYEIMFGPDICGPGTXKVHV 551
           N +VVQ+ +K E+  +CGGGYLK+     + +  +   +T Y IMFGPD CG  T KVH+
Sbjct: 136 NTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-ATGKVHL 194

Query: 552 IFXYXGKXHLIKKDIRCK----------DDVXTHLYTLIVKPXNXYEXLIDHXXXXSGDL 701
           IF Y    +    +              DD  THL+TL+VKP   Y   +D      G++
Sbjct: 195 IFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNM 254


>Z75712-10|CAB00039.2|  332|Caenorhabditis elegans Hypothetical
           protein K04G2.2 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = -3

Query: 568 PX*XKITCTXXVPGPQMSGPNIISYGVSPCMSXC----SSLQSKTLRYPPPQS 422
           P    ++ T   P P+  GPN +S+    C+  C    SS+ SK    PP  S
Sbjct: 6   PSGSSMSSTPGSPPPRAGGPNSVSFKDLCCLFCCPPFPSSIVSKLAFMPPEPS 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,316,233
Number of Sequences: 27780
Number of extensions: 262874
Number of successful extensions: 548
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)