Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O06
         (1049 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.23 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.71 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   5.0  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   5.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 0.23
 Identities = 18/52 (34%), Positives = 18/52 (34%)
 Frame = -3

Query: 639 GXAGEXXIGGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRDXGXAGRGXXXG 484
           G  G    GGA G GG      GPGG      R      RD    G G   G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252



 Score = 27.5 bits (58), Expect = 0.71
 Identities = 19/64 (29%), Positives = 22/64 (34%)
 Frame = -3

Query: 654 GGXXXGXAGEXXIGGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRDXGXAGRGXXXGXRX 475
           G    G  G    GG   +GG     GG GG      R  R   R+ G  G G   G + 
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHR-DRDREREGGGNGGGGGGGMQL 259

Query: 474 XSXG 463
              G
Sbjct: 260 DGRG 263


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 0.71
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 572 PPXXXXLPPVPXAPPIXXSPASPXXXP 652
           PP    +P +P APP+   P  P   P
Sbjct: 86  PPRPGMIPGMPGAPPLLMGPNGPLPPP 112



 Score = 24.2 bits (50), Expect = 6.6
 Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
 Frame = +2

Query: 485 PXXXPLPAXPXSLPXXRXC--LVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
           P    +P  P  +P       L+ G   P  PP     PP    P +   P      PP
Sbjct: 80  PPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRPP 138


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 630 GEXXIGGAXGTGGSXXXXGGPGG 562
           G   +GG  G GG     GG GG
Sbjct: 672 GGGAVGGGSGAGGGAGSSGGSGG 694



 Score = 24.6 bits (51), Expect = 5.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -3

Query: 615 GGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRD 517
           GG  G GG     GG GG   P  +  R    D
Sbjct: 293 GGVGGGGGGGGGGGGGGGSAGPVQQPSRSASID 325


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 5.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -3

Query: 615 GGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRD 517
           GG  G GG     GG GG   P  +  R    D
Sbjct: 293 GGVGGGGGGGGGGGGGGGSAGPVQQPSRSASID 325


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 5.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -3

Query: 615 GGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRD 517
           GG  G GG     GG GG   P  +  R    D
Sbjct: 245 GGVGGGGGGGGGGGGGGGSAGPVQQPSRSASID 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,026
Number of Sequences: 2352
Number of extensions: 7218
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 116752116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)