Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O06
(1049 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 34 0.19
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 33 0.34
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 33 0.45
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 33 0.45
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.78
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.78
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.78
AL031621-1|CAA20933.1| 279|Caenorhabditis elegans Hypothetical ... 31 1.0
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.8
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 31 1.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 3.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 7.3
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 7.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 7.3
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 28 9.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 9.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 9.7
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 9.7
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.9 bits (74), Expect = 0.19
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -3
Query: 657 WGGXXXGXAGEXXIGGAXGTGGSXXXXGG--PGGXXXPXTRHXRXXGRDXGXAGRG 496
WGG G G GG G GG GG GG R GR G GRG
Sbjct: 81 WGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 33.1 bits (72), Expect = 0.34
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 738 PAXPPXPLPXPXTXPQLPDPXCP 806
P PP P+P P P +P P CP
Sbjct: 72 PPPPPPPMPCPPPPPPMPRPSCP 94
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 32.7 bits (71), Expect = 0.45
Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +3
Query: 276 TCVVQPLHLIKTRMQXSGQREXXXXXXXXXXXXXXL----LXHCTPGXSDGXLRPAXYXT 443
T VVQPL L+K RMQ SG + + G S G LR A Y T
Sbjct: 24 TLVVQPLDLVKNRMQLSGTTGKKEYRSSMHALTSIMKNEGVFAVYNGLSAGLLRQATYTT 83
Query: 444 TRL 452
TRL
Sbjct: 84 TRL 86
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 32.7 bits (71), Expect = 0.45
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 551 GXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
G PP PP PP P APP P P P
Sbjct: 121 GVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAP 155
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +2
Query: 497 PLPAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P P P LP + G PP PP PP P PP P PP
Sbjct: 743 PPPPPPGGLPP-----ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +2
Query: 497 PLPAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P+ P P PP PP PP P PP P PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 563 PPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
PP PP LPP+ PP P P PP
Sbjct: 726 PPPPPPPGGLPPITGGPP---PPPPPGGLPP 753
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +2
Query: 497 PLPAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P P P LP + G PP PP PP P PP P PP
Sbjct: 743 PPPPPPGGLPP-----ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +2
Query: 497 PLPAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P+ P P PP PP PP P PP P PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 563 PPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
PP PP LPP+ PP P P PP
Sbjct: 726 PPPPPPPGGLPPITGGPP---PPPPPGGLPP 753
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +2
Query: 497 PLPAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P P P LP + G PP PP PP P PP P PP
Sbjct: 326 PPPPPPGGLPP-----ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +2
Query: 497 PLPAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P+ P P PP PP PP P PP P PP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 563 PPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
PP PP LPP+ PP P P PP
Sbjct: 309 PPPPPPPGGLPPITGGPP---PPPPPGGLPP 336
>AL031621-1|CAA20933.1| 279|Caenorhabditis elegans Hypothetical
protein F28H6.2 protein.
Length = 279
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 173 ENINNGSIIRRAAERALYTXWIEVRVWWPWRNGGDXR-CPAFTFDQDXNAXERSAGXA 343
+N NN I+ A+ L EVR W+ WRNG + R T +Q A ER A
Sbjct: 136 KNPNNDEILEIMADTGLSRK--EVRRWFQWRNGTNFRIVRPVTEEQKKRAAERERSRA 191
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 503 PAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P P + P + C PPGPP P P P SPA P P
Sbjct: 153 PCEPSTPPPCQPC----PAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGP 199
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 566 PGPPXXXXLPPVPXAPPIXXSPASPXXXPPHR 661
P PP +PP+P AP + +P PP R
Sbjct: 157 PQPPRFAEVPPIPDAPTNPPTTTTPPPPPPTR 188
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +2
Query: 506 AXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPP---IXXSPASPXXXPP 655
A P P R G PP PP P P +PP +P SP PP
Sbjct: 120 ASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 539 CLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXP 652
C + G PPG P P P AP + +P P P
Sbjct: 89 CCLPGAQGPPGTPGRAGRPGKPGAPGLNGNPGRPPKEP 126
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 485 PXXXPLPAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P P+P P P G PP PP P P P + P PP
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -3
Query: 654 GGXXXGXAGEXXIGGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRDXGXAGRGXXXG 484
GG G G GG G GG GG GG G G G G G
Sbjct: 106 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -3
Query: 654 GGXXXGXAGEXXIGGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRDXGXAGRGXXXG 484
GG G G GG G GG GG GG G G G G G
Sbjct: 106 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 485 PXXXPLPAXPXSLPXXRXCLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXPP 655
P P+P P P G PP PP P P P + P PP
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 539 CLVFGXXXPPGPPXXXXLPPVPXAPPIXXSPASPXXXP 652
C + G PPG P P P AP + +P P P
Sbjct: 91 CCLPGAQGPPGTPGSAGRPGKPGAPGLNGNPGRPPKEP 128
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = -3
Query: 657 WGGXXXGXAGEXXIGGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRDXGXAGRGXXXGXR 478
WGG G G GG+ G GG G G G GRG G
Sbjct: 148 WGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGE 207
Query: 477 XXSXG 463
G
Sbjct: 208 QGGWG 212
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 654 GGXXXGXAGEXXIGGAXGTGGSXXXXGGPGG 562
GG G G GG G GG GG GG
Sbjct: 112 GGGGCGGGGGGGCGGGGGGGGGGYASGGSGG 142
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 563 PPGPPXXXXLPPVPXAPPIXXSPASPXXXP-PH 658
PPGP LP APP P+ P P PH
Sbjct: 70 PPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPH 102
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 657 WGGXXXGXAGEXXIGGAXGTGGSXXXXGGPGG 562
+GG G A GGA G GG GG GG
Sbjct: 80 YGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGG 111
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 657 WGGXXXGXAGEXXIGGAXGTGGSXXXXGGPGG 562
+GG G G+ GG+ TGG GG G
Sbjct: 223 FGGQQGGQGGQGGFGGSTRTGGMQGGQGGQSG 254
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 563 PPGPPX-XXXLPPVPXAPPIXXSPASPXXXPPHR 661
PPGPP PP P PP P P PP R
Sbjct: 246 PPGPPGPPTRRPPGPPGPPTRRPPGPP--GPPTR 277
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 615 GGAXGTGGSXXXXGGPGGXXXPXTRHXRXXGRDXGXAGRG 496
GG G GG GG G P + R GR G G
Sbjct: 832 GGGYGGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPPG 871
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 720 EIIAXXPAXPPXPLPXPXTXPQLPDPXCPTXXP-XLXXXTPXXPLP 854
E+I P P P P P+ P P PT P + TP P P
Sbjct: 532 ELILPSPEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPP 577
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +3
Query: 720 EIIAXXPAXPPX--PLPXPXTXPQLPDPXCPT-XXPXLXXXTPXXPLP 854
EI A PA P P P P + PQ+ +P P P P PLP
Sbjct: 1736 EIPAPGPAPGPALEPAPAPTSAPQIVEPLPPVQPLPQPQPTEPEEPLP 1783
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,376,098
Number of Sequences: 27780
Number of extensions: 168566
Number of successful extensions: 1547
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2793417546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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