Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O05
(1007 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 36 0.046
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 33 0.24
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 27 0.32
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.43
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 0.98
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 0.98
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.98
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.98
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.98
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.98
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.98
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.98
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 0.98
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 1.3
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.7
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.3
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.3
AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical ... 30 2.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.3
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 3.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 3.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 3.0
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 3.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 3.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 4.0
AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical ... 25 4.8
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 29 5.2
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 6.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 24 8.8
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 9.2
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 9.2
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 28 9.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 9.2
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 9.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 24 9.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 24 9.9
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 35.9 bits (79), Expect = 0.046
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
GGGGGGGG PPP PP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPP 837
GG GGG PPPPPP
Sbjct: 36 GGGGGGCCAPPPPPP 50
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPP 834
GG GGG PPPPPP
Sbjct: 35 GGGGGGGCCAPPPPPP 50
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG GGG PPPPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 33.5 bits (73), Expect = 0.24
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 835 GGGGGGGXXXPPPXPP 882
GGGGGGG PPP PP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPP 837
GG GGG PPPPPP
Sbjct: 32 GGGGGGDAAPPPPPP 46
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPP 834
GG GGG PPPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 834 GGGGXGGXXXXPPPPP 881
GGGG GG PPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 878 GXGGGXXXPPPPPPPP 831
G GGG PPPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 26.6 bits (56), Expect(2) = 0.54
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 854 PPPPPPPP 831
PPPPPPPP
Sbjct: 576 PPPPPPPP 583
Score = 26.6 bits (56), Expect(2) = 0.32
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 854 PPPPPPPP 831
PPPPPPPP
Sbjct: 589 PPPPPPPP 596
Score = 25.0 bits (52), Expect(2) = 0.32
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 866 GXXXPPPPPPP 834
G PPPPPPP
Sbjct: 574 GAPPPPPPPPP 584
Score = 24.2 bits (50), Expect(2) = 0.54
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 872 GGGXXXPPPPPPP 834
G PPPPPPP
Sbjct: 555 GTNVPIPPPPPPP 567
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 153 PXXPPAPWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPP 290
P PPAP PP P F K PPP F PPP
Sbjct: 713 PGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPP 758
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.56
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
GGGGG GG PPP PP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 32.3 bits (70), Expect = 0.56
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
GGGGG GG PPP PP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 881 GGXGGGXXXPPPPP 840
GG GGG PPPPP
Sbjct: 46 GGCGGGCAPPPPPP 59
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 881 GGXGGGXXXPPPPP 840
GG GGG PPPPP
Sbjct: 103 GGCGGGCAPPPPPP 116
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 878 GXGGGXXXPPPPPPPP 831
G GGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 880 GGGGGXXXXPPXPPPP 833
GGGGG PP PPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 835 GGGGGGGXXXPPPXPP 882
GGGGG G PPP PP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 878 GXGGGXXXPPPPPPPP 831
G GGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 880 GGGGGXXXXPPXPPPP 833
GGGGG PP PPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 835 GGGGGGGXXXPPPXPP 882
GGGGG G PPP PP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 878 GXGGGXXXPPPPPPPP 831
G GGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 880 GGGGGXXXXPPXPPPP 833
GGGGG PP PPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 835 GGGGGGGXXXPPPXPP 882
GGGGG G PPP PP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.98
Identities = 25/94 (26%), Positives = 25/94 (26%)
Frame = -2
Query: 517 PXXGGXKKXXXGXKKXXGGXXXPPPPXXKKKIFXXXXXPXXKKXXTFFXXXXPKXGXXXP 338
P G G GG PPPP I P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-------GGLPPISGGPP 759
Query: 337 PPPPPXXGXXPKKXXRGGGXFFKKXXPXXGGGFF 236
PPPPP G P G F P G F
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +3
Query: 153 PXXPPA---PWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPPRXXFFGXXP 317
P PP P G PP +PP PPP G PPP F G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 153 PXXPPA--PWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPP 290
P PP P G PP +PP PPP G + PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 854 PPPPPPP 834
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 851 PPPPPPP 831
PPPPPPP
Sbjct: 742 PPPPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.98
Identities = 25/94 (26%), Positives = 25/94 (26%)
Frame = -2
Query: 517 PXXGGXKKXXXGXKKXXGGXXXPPPPXXKKKIFXXXXXPXXKKXXTFFXXXXPKXGXXXP 338
P G G GG PPPP I P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-------GGLPPISGGPP 759
Query: 337 PPPPPXXGXXPKKXXRGGGXFFKKXXPXXGGGFF 236
PPPPP G P G F P G F
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +3
Query: 153 PXXPPA---PWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPPRXXFFGXXP 317
P PP P G PP +PP PPP G PPP F G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 153 PXXPPA--PWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPP 290
P PP P G PP +PP PPP G + PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 854 PPPPPPP 834
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 851 PPPPPPP 831
PPPPPPP
Sbjct: 742 PPPPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.98
Identities = 25/94 (26%), Positives = 25/94 (26%)
Frame = -2
Query: 517 PXXGGXKKXXXGXKKXXGGXXXPPPPXXKKKIFXXXXXPXXKKXXTFFXXXXPKXGXXXP 338
P G G GG PPPP I P P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP-------GGLPPISGGPP 342
Query: 337 PPPPPXXGXXPKKXXRGGGXFFKKXXPXXGGGFF 236
PPPPP G P G F P G F
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +3
Query: 153 PXXPPA---PWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPPRXXFFGXXP 317
P PP P G PP +PP PPP G PPP F G P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 153 PXXPPA--PWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPP 290
P PP P G PP +PP PPP G + PPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 854 PPPPPPP 834
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 851 PPPPPPP 831
PPPPPPP
Sbjct: 325 PPPPPPP 331
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.98
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +3
Query: 162 PPAPWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPPRXXFFGXXPXXGGGGGG 341
PP P PP + PP PPP G PPP+ G P G G
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA---GGSPPPAGTGSP 329
Query: 342 XXXP 353
P
Sbjct: 330 PPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.98
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +3
Query: 162 PPAPWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPPRXXFFGXXPXXGGGGGG 341
PP P PP + PP PPP G PPP+ G P G G
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA---GGSPPPAGTGSP 350
Query: 342 XXXP 353
P
Sbjct: 351 PPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.98
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +3
Query: 162 PPAPWXGXXXPPXKXTXVPPXFXKKKXPPPXXGXFFLKKXPPPRXXFFGXXPXXGGGGGG 341
PP P PP + PP PPP G PPP+ G P G G
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA---GGSPPPAGTGSP 335
Query: 342 XXXP 353
P
Sbjct: 336 PPPP 339
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPP 837
GG GGG PPPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 838 GGGGGGXXXPPPXPP 882
GGGGGG PPP PP
Sbjct: 22 GGGGGGCCAPPPPPP 36
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = -2
Query: 352 GXXXPPPPPPXXGXXPKKXXRGGGXFFKKXXPXXGGGFFFXXKXGGTXVNFXGGXK-XPX 176
G PPPPPP G GG P GGG+ G F G + P
Sbjct: 27 GCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAP-IGGGYAQPGGGYGGAGGFGGAYQAAPA 85
Query: 175 XGAGG 161
G GG
Sbjct: 86 IGGGG 90
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 878 GXGGGXXXPPPPPPP 834
G GGG PPPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 837 GGGXGGXXXXPPPPP 881
GGG GG PPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 878 GXGGGXXXPPPPPPPP 831
G G G PPPPPPPP
Sbjct: 58 GGGYGCGIPPPPPPPP 73
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG GGG PP PP PP
Sbjct: 633 GGGGGGPTGPPAPPKPP 649
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
G GGGGGG PP PP
Sbjct: 630 GPGGGGGGGPTGPPAPP 646
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +1
Query: 832 GGGGGGGGXXXP-PPXPP 882
GGGGGGG P PP PP
Sbjct: 632 GGGGGGGPTGPPAPPKPP 649
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG GGG PP PP PP
Sbjct: 633 GGGGGGPTGPPAPPKPP 649
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
G GGGGGG PP PP
Sbjct: 630 GPGGGGGGGPTGPPAPP 646
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +1
Query: 832 GGGGGGGGXXXP-PPXPP 882
GGGGGGG P PP PP
Sbjct: 632 GGGGGGGPTGPPAPPKPP 649
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 835 GGGGGGGXXXPPPXPP 882
GGGGGGG PP PP
Sbjct: 397 GGGGGGGEAAPPSSPP 412
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)
Frame = -1
Query: 881 GGXGGGXXXP----PPPPPPP 831
GG GGG P PPPPPPP
Sbjct: 83 GGGGGGYGRPQGYVPPPPPPP 103
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 5/22 (22%)
Frame = +1
Query: 832 GGGGGGG-----GXXXPPPXPP 882
GGGGGGG G PPP PP
Sbjct: 82 GGGGGGGYGRPQGYVPPPPPPP 103
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG GG PPPPPP P
Sbjct: 22 GGGGGCGCAPPPPPPSP 38
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 872 GGGXXXPPPPPPPP 831
G G PPPPPPPP
Sbjct: 243 GAGAPPPPPPPPPP 256
>AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical
protein C18E3.6 protein.
Length = 457
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 869 GGXXXPPPPPPPP 831
GG PPPPPPPP
Sbjct: 217 GGAPTPPPPPPPP 229
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 872 GGGXXXPPPPPPPP 831
G G PPPPPPPP
Sbjct: 229 GAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 872 GGGXXXPPPPPPPP 831
G G PPPPPPPP
Sbjct: 229 GAGAPPPPPPPPPP 242
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 872 GGGXXXPPPPPPP 834
GGG PPPPPPP
Sbjct: 48 GGGYEAPPPPPPP 60
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG GG PPPPPP P
Sbjct: 667 GGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG GG PPPPPP P
Sbjct: 667 GGLGGFMPPPPPPPPMP 683
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPP 834
GG GGG PPPPPP
Sbjct: 202 GGSGGGSGRFPPPPPP 217
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 835 GGGGGGGXXXPPPXPP 882
GG GGG PPP PP
Sbjct: 202 GGSGGGSGRFPPPPPP 217
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXP 879
GG GGG G PPP P
Sbjct: 202 GGSGGGSGRFPPPPPP 217
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 26.6 bits (56), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 854 PPPPPPPP 831
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 21.4 bits (43), Expect(2) = 3.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 866 GXXXPPPPPPP 834
G P PPPPP
Sbjct: 268 GQYPPVPPPPP 278
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 26.6 bits (56), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 854 PPPPPPPP 831
PPPPPPPP
Sbjct: 297 PPPPPPPP 304
Score = 21.4 bits (43), Expect(2) = 3.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 866 GXXXPPPPPPP 834
G P PPPPP
Sbjct: 258 GQYPPVPPPPP 268
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXP 879
GGG GGGG PPP P
Sbjct: 39 GGGCGGGGGCAPPPAP 54
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXP 879
GGG GGGG PPP P
Sbjct: 63 GGGCGGGGGCAPPPAP 78
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 340 PPPPPPXXGXXPKKXXRGGGXFFKKXXPXXGGGFFFXXKXGGTXVNFXGG 191
PPPPPP P GGG + + GGG + GG + GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGG--YSEQSSGGGGGSSY--SGGGEASSSSGG 348
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG PPPPPPPP
Sbjct: 293 GGYSAPAAAPPPPPPPP 309
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 832 GGGGGGGG 855
GGGGGGGG
Sbjct: 26 GGGGGGGG 33
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 835 GGGGGGGXXXPPPXPP 882
GGG GGG PP P
Sbjct: 39 GGGCGGGGGCAPPPAP 54
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXP 879
GGG GGGG PPP P
Sbjct: 39 GGGCGGGGGCAPPPAP 54
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXP 879
GGG GGGG PPP P
Sbjct: 63 GGGCGGGGGCAPPPAP 78
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 340 PPPPPPXXGXXPKKXXRGGGXFFKKXXPXXGGGFFFXXKXGGTXVNFXGG 191
PPPPPP P GGG + + GGG + GG + GG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGG--YSEQSSGGGGGSSY--SGGGEASSSSGG 348
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG PPPPPPPP
Sbjct: 293 GGYSAPAAAPPPPPPPP 309
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 832 GGGGGGGG 855
GGGGGGGG
Sbjct: 26 GGGGGGGG 33
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 835 GGGGGGGXXXPPPXPP 882
GGG GGG PP P
Sbjct: 39 GGGCGGGGGCAPPPAP 54
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXP 879
GGGGGG G PPP P
Sbjct: 23 GGGGGGCGCGAPPPPP 38
>AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical
protein F33E11.2 protein.
Length = 366
Score = 25.0 bits (52), Expect(2) = 4.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 866 GXXXPPPPPPP 834
G PPPPPPP
Sbjct: 236 GILAPPPPPPP 246
Score = 22.6 bits (46), Expect(2) = 4.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 854 PPPPPPPP 831
PPPPPP P
Sbjct: 241 PPPPPPLP 248
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG G PPPPPPP
Sbjct: 560 GGYSNGNNFQPPPPPPP 576
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG G PPPPPPP
Sbjct: 531 GGYSNGNNFQPPPPPPP 547
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPPPP 831
GG G PPPPPPP
Sbjct: 560 GGYSNGNNFQPPPPPPP 576
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 878 GXGGGXXXPPPPPPP 834
G GGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 880 GGGGGXXXXPPXPPP 836
GGGGG PP PPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 24.2 bits (50), Expect(2) = 8.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 361 PKXGXXXPPPPPP 323
P G PPPPPP
Sbjct: 45 PMCGCAPPPPPPP 57
Score = 22.6 bits (46), Expect(2) = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 340 PPPPPPXXG 314
PPPPPP G
Sbjct: 55 PPPPPPMCG 63
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
GGGGGGGG P PP
Sbjct: 337 GGGGGGGGGLDPFTFPP 353
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
GGGGGGGG P PP
Sbjct: 337 GGGGGGGGGLDPFTFPP 353
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
GGGGGGGG P PP
Sbjct: 337 GGGGGGGGGLDPFTFPP 353
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 832 GGGGGGGGXXXPPPXPP 882
GGGGGGGG P PP
Sbjct: 337 GGGGGGGGGLDPFTFPP 353
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 881 GGXGGGXXXPPPPPP 837
GG GGG PPPPP
Sbjct: 38 GGCGGGCGCAPPPPP 52
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 890 KXXGGXGGGXXXPPPPPPPP 831
K G GG PPPPPPPP
Sbjct: 1004 KAPAGPGG---PPPPPPPPP 1020
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 890 KXXGGXGGGXXXPPPPPPPP 831
K G GG PPPPPPPP
Sbjct: 243 KAPAGPGG---PPPPPPPPP 259
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 361 PKXGXXXPPPPPP 323
P G PPPPPP
Sbjct: 642 PAVGAGAPPPPPP 654
Score = 22.2 bits (45), Expect(2) = 9.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 340 PPPPPPXXGXXP 305
PPPPPP P
Sbjct: 652 PPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.2 bits (50), Expect(2) = 9.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 361 PKXGXXXPPPPPP 323
P G PPPPPP
Sbjct: 468 PAVGAGAPPPPPP 480
Score = 22.2 bits (45), Expect(2) = 9.9
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 340 PPPPPPXXGXXP 305
PPPPPP P
Sbjct: 478 PPPPPPSGAGGP 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,194,122
Number of Sequences: 27780
Number of extensions: 257794
Number of successful extensions: 5409
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3240
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2646946214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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