Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O03
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 179 1e-44
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 179 1e-44
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 179 1e-44
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 179 1e-44
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 85 2e-16
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 71 5e-12
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 41 0.005
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 41 0.005
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 32 2.3
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 32 2.3
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 32 2.3
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 5.3
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 5.3
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.3
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.3
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 5.3
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 5.3
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 5.3
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 5.3
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 5.3
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 5.3
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 179 bits (436), Expect = 1e-44
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +1
Query: 199 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 378
+ P EP+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD
Sbjct: 42 IEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVD 101
Query: 379 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 513
EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
Score = 85.4 bits (202), Expect = 2e-16
Identities = 35/48 (72%), Positives = 46/48 (95%)
Frame = +3
Query: 84 RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 227
+ P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKL 51
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 179 bits (436), Expect = 1e-44
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +1
Query: 199 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 378
+ P EP+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD
Sbjct: 42 IEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVD 101
Query: 379 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 513
EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
Score = 85.4 bits (202), Expect = 2e-16
Identities = 35/48 (72%), Positives = 46/48 (95%)
Frame = +3
Query: 84 RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 227
+ P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKL 51
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 179 bits (436), Expect = 1e-44
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +1
Query: 199 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 378
+ P EP+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD
Sbjct: 42 IEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVD 101
Query: 379 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 513
EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
Score = 85.4 bits (202), Expect = 2e-16
Identities = 35/48 (72%), Positives = 46/48 (95%)
Frame = +3
Query: 84 RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 227
+ P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKL 51
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 179 bits (436), Expect = 1e-44
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +1
Query: 199 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 378
+ P EP+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD
Sbjct: 42 IEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVD 101
Query: 379 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 513
EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
Score = 85.4 bits (202), Expect = 2e-16
Identities = 35/48 (72%), Positives = 46/48 (95%)
Frame = +3
Query: 84 RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 227
+ P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKL 51
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 85.4 bits (202), Expect = 2e-16
Identities = 35/48 (72%), Positives = 46/48 (95%)
Frame = +3
Query: 84 RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 227
+ P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL
Sbjct: 4 KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKL 51
Score = 57.2 bits (132), Expect = 7e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +1
Query: 199 LSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAI 339
+ P EP+LLLGKE+F+ VDIRV VKGGGHVAQ+Y Q +
Sbjct: 42 IEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYGESQEL 88
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 356 PSTRNM*TKPQRRKSKTS*YNTIGVCW 436
P TRNM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 70.9 bits (166), Expect = 5e-12
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +1
Query: 241 LLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 417
LLL KE+ + +DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 67 LLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 93 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKL 227
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKL 62
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 41.1 bits (92), Expect = 0.005
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +1
Query: 274 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 453
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 327 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 376
Query: 454 CEPKKFGGPGARARY 498
E KK G GAR ++
Sbjct: 377 RERKKPGQEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 41.1 bits (92), Expect = 0.005
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +1
Query: 274 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 453
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 233 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 282
Query: 454 CEPKKFGGPGARARY 498
E KK G GAR ++
Sbjct: 283 RERKKPGQEGARRKF 297
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 142 RIASVVMECCV*TGAHWTWLSPDCCSTNFSEPILLLGKEKFSMV 273
RI V+E G WT ++PDC ST F P LL ++ F V
Sbjct: 9445 RIKGYVIEKRTIDGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRV 9488
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 142 RIASVVMECCV*TGAHWTWLSPDCCSTNFSEPILLLGKEKFSMV 273
RI V+E G WT ++PDC ST F P LL ++ F V
Sbjct: 16869 RIKGYVIEKRTIDGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRV 16912
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 142 RIASVVMECCV*TGAHWTWLSPDCCSTNFSEPILLLGKEKFSMV 273
RI V+E G WT ++PDC ST F P LL ++ F V
Sbjct: 9445 RIKGYVIEKRTIDGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRV 9488
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 5.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 313 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 444
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,570,008
Number of Sequences: 237096
Number of extensions: 2497957
Number of successful extensions: 5161
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5159
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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