Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O03
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 158 4e-39
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.0
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 1.8
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 1.8
Z81568-1|CAB04594.1| 681|Caenorhabditis elegans Hypothetical pr... 28 9.7
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 28 9.7
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 28 9.7
U21318-1|AAC46669.1| 457|Caenorhabditis elegans Hypothetical pr... 28 9.7
L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical... 28 9.7
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 158 bits (384), Expect = 4e-39
Identities = 71/106 (66%), Positives = 86/106 (81%)
Frame = +1
Query: 196 WLSPDCCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYV 375
+L P EP+LL+GKE+F VDIR+ V GGGHVAQ+YA+RQA++KAL+A+Y KYV
Sbjct: 39 FLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYV 98
Query: 376 DEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 513
DE SK+E+K+I YD+SLLVADPRR E KKFGGPGARARYQKSYR
Sbjct: 99 DEQSKRELKNIFAAYDKSLLVADPRRRESKKFGGPGARARYQKSYR 144
Score = 74.5 bits (175), Expect = 9e-14
Identities = 30/46 (65%), Positives = 42/46 (91%)
Frame = +3
Query: 93 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQ 230
+Q+VQ FGRKKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQ
Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQ 50
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 370 YVDEASKKEIKDILVQYDRSLLVADPRRCE 459
+ DE +KE+ D+ QYDRS+ + D R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 303 TTTLDCHSDVNHREFFLAEQKD-RFTEV 223
TT LDC + H EF+ AE D RFT++
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDADARFTDI 173
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 303 TTTLDCHSDVNHREFFLAEQKD-RFTEV 223
TT LDC + H EF+ AE D RFT++
Sbjct: 21 TTFLDCLMEQTHPEFYRAEDADARFTDI 48
>Z81568-1|CAB04594.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.1 protein.
Length = 681
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -3
Query: 255 LAEQKDRFTEVCTAAVWAQPSPM--GARLHAAFHDHACNTQL 136
LA Q R T W QP P+ AR AA+H + C T L
Sbjct: 92 LARQSVRQTRPNQVPNWLQPIPVPANARGQAAYHPYDCMTLL 133
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 243 FARQGKILYG*HQSDSQGWWSCSTSLRYQTSYFKGSDRLL 362
FAR +Y + WW+ S Y ++ KG+D LL
Sbjct: 399 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALL 438
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 243 FARQGKILYG*HQSDSQGWWSCSTSLRYQTSYFKGSDRLL 362
FAR +Y + WW+ S Y ++ KG+D LL
Sbjct: 662 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALL 701
>U21318-1|AAC46669.1| 457|Caenorhabditis elegans Hypothetical
protein K03H9.3 protein.
Length = 457
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 211 CCSTNFSEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQ 366
C ST SE +L KEK + + ++ VA V +AI KAL + YQ
Sbjct: 38 CDSTWLSESFVL-AKEKAAAIALKTECSFDLSVASVKGPNEAIVKALSSIYQ 88
>L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical
protein F09G8.3 protein.
Length = 392
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 430 LLVADPRRCEPKKFGGPGARARY 498
LL DPR+ E K PGARA++
Sbjct: 365 LLTLDPRKNERSKVNQPGARAKW 387
>AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical
protein Y37A1B.9 protein.
Length = 520
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 249 RQGKILYG*HQSDSQ---GWWSCSTSLRYQTSYFKGSDRLLPEIC 374
R+ +I+ H + GW S L Y+T+Y + L P+ C
Sbjct: 259 RENEIIINIHDNPEMTRLGWTSLEYKLGYRTTYIMNLENLHPDFC 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,783,926
Number of Sequences: 27780
Number of extensions: 346230
Number of successful extensions: 696
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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