Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O02
         (854 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641...    31   0.89 
04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784     30   2.0  
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093           30   2.7  

>06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,
            6412568-6412695,6412855-6412971,6414936-6415475,
            6415554-6417344,6418359-6421407,6421765-6421823,
            6422738-6422791
          Length = 1978

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = +2

Query: 596  KFILGPLLSFSLDSETQSQLGKLLNNIAVSLQEVFEAQGTILMTSYI 736
            K  + PL  + LD +TQSQ G+LL   A++L ++F+ +G    T  +
Sbjct: 1740 KNAIAPLSMYLLDPQTQSQQGRLL--AALALGDLFQNEGLARSTDAV 1784


>04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784
          Length = 1035

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 263 LSYSSVAXPNRNLTVASHXVKTXGFDTIKIIEFYINSK 376
           L+ S+VA    +  +A+H + T   DT++++E++  SK
Sbjct: 310 LAASAVAQTVSSFFLAAHQIDTESKDTVELVEYFFKSK 347


>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
          Length = 1040

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 263 LSYSSVAXPNRNLTVASHXVKTXGFDTIKIIEFYINSK 376
           L+ S+VA    +  +A H + T   DT++++E++  SK
Sbjct: 310 LAASAVAQTVSSFFLAEHQIDTESKDTVELVEYFFKSK 347


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,325,920
Number of Sequences: 37544
Number of extensions: 244198
Number of successful extensions: 507
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)