Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_O01
(841 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 210 4e-53
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 192 7e-48
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 183 6e-45
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 153 7e-36
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 152 9e-36
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 128 1e-28
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 124 2e-27
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 120 6e-26
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 120 6e-26
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 119 1e-25
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 101 2e-20
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 92 1e-17
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 78 2e-13
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 78 3e-13
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 77 4e-13
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 77 6e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 69 2e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 55 2e-06
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 53 8e-06
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 52 2e-05
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 51 4e-05
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 51 4e-05
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 48 3e-04
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 47 7e-04
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 46 0.001
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 44 0.006
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 42 0.019
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 41 0.034
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 41 0.034
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 41 0.045
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 37 0.72
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 36 1.3
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 35 2.2
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 33 6.8
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 210 bits (512), Expect = 4e-53
Identities = 106/172 (61%), Positives = 123/172 (71%)
Frame = +1
Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
MVKKWQTLIE ++DVKT DG++LRVFCIGF KDS+SQ KTCYAQ + ++ IR M I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 622 ITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
I +T ++ VV L+PDSI I YPL V VK RF
Sbjct: 175 IKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRF 226
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNENCFGR 281
AVG G+S GG G +V PFTRK WY VKAP+MF QVG TLVNRTQG +
Sbjct: 2 AVGKNKGVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDG 61
Query: 282 IEGKSF 299
++G+ F
Sbjct: 62 LKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 192 bits (469), Expect = 7e-48
Identities = 103/179 (57%), Positives = 120/179 (67%)
Frame = +1
Query: 241 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 420
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 421 LTTDKLRWMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAI 600
LT DK+ MVKKWQT+IEA++DVKT DGY+LR+FC+GF K + KT YAQ VR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 601 RKXMCEIITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
RK M EI+T V ++ EVVN LIPDSI I YPL V VK +F
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKF 223
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +3
Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNENCFGR 281
AVG L+ GG G +V PF++K WY VKAP+MF+ +G TLV RTQG +
Sbjct: 2 AVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDG 61
Query: 282 IEGKSF 299
++G+ F
Sbjct: 62 LKGRVF 67
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 183 bits (445), Expect = 6e-45
Identities = 96/172 (55%), Positives = 113/172 (65%)
Frame = +1
Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
+V+KWQTLIEA++DVKT D Y LR+FCI F K KTCYAQ + +R IR+ M EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 622 ITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
+T T + E+V IP+SI I YPL V VK +F
Sbjct: 567 MTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKF 618
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +3
Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNE 266
AVG +S G G PF +K WY +KAPS+F VG TLV+RTQG +
Sbjct: 397 AVGKNKRISKGKKGG-KKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTK 450
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 153 bits (370), Expect = 7e-36
Identities = 78/142 (54%), Positives = 102/142 (71%)
Frame = +1
Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
++ KW TLIE +DVKT DGY LRVF I F K + KT YA+ + V+AIRK M +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 622 ITXXVTXSEXXEVVNXLIPDSI 687
+T V+ ++ VV+ LI S+
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSL 192
Score = 45.6 bits (103), Expect = 0.002
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Frame = +3
Query: 162 VXPFTRKXWYXVKAPSMFSK----XQVGTTLVNRTQGNENCFGRIEGKSF 299
V PFTRK WY V+AP+ F K +VG T VNRTQG + ++G+ +
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 152 bits (369), Expect = 9e-36
Identities = 80/171 (46%), Positives = 104/171 (60%)
Frame = +1
Query: 265 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 444
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 445 MVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEII 624
+V+KWQ+LIEAN+ VKT D Y+LR+F I + KT YA + +RAIR+ M EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 625 TXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
+ ++ N LIP+ I I G YPL V VK +F
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKF 223
Score = 54.0 bits (124), Expect = 4e-06
Identities = 28/66 (42%), Positives = 37/66 (56%)
Frame = +3
Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNENCFGR 281
AVG LS G G+ PF RK WY +KAP+ F+ VG TLVNR+ G +N
Sbjct: 2 AVGKNKRLSKG-KKGLKKKTQDPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDA 60
Query: 282 IEGKSF 299
++G+ F
Sbjct: 61 LKGRIF 66
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 128 bits (310), Expect = 1e-28
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 3/175 (1%)
Frame = +1
Query: 241 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 420
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 421 LTTDKLRWMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSL---SQXKTCYAQXTXV 591
+T D+L M++KWQTLIEA +D KT DGY++RVF + F K S S TCYA+ + V
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 592 RAIRKXMCEIITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVK 756
RAIR+ + IT E LI + I +PL + VK
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVK 222
Score = 46.8 bits (106), Expect = 7e-04
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 108 GXXXGL-SXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNENCFGRI 284
G GL + GG G + P +RK WY +AP FS G TLV ++ GN I
Sbjct: 4 GKNPGLKAGGGKKGAKKRTIDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEI 63
Query: 285 EGKSFRS 305
+G+ S
Sbjct: 64 KGRVVES 70
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 124 bits (300), Expect = 2e-27
Identities = 66/137 (48%), Positives = 88/137 (64%)
Frame = +1
Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
+VKKW TLIE ++DVKT DG+++R+FCIGF ++ S KT YA+ ++ IRK M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 622 ITXXVTXSEXXEVVNXL 672
IT E + V+ L
Sbjct: 174 ITKEAASRELTQFVDYL 190
Score = 42.3 bits (95), Expect = 0.015
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 144 GVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNENCFGRIEGK 293
G + PF++K WY VK P F + VG +VN+T G +++G+
Sbjct: 17 GSKRKIAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 120 bits (288), Expect = 6e-26
Identities = 57/172 (33%), Positives = 97/172 (56%)
Frame = +1
Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
+++KW T +E ++VKT DGY +R+F + F + Q + CYA+ V+ +R + ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 622 ITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
I ++ + E V+ L + + + + PL + V+ +F
Sbjct: 175 IKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKF 226
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +3
Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNENCFGR 281
A+G +S GG G RK WY V AP+ F K Q T+ N+TQG
Sbjct: 2 ALGKNKRISKGGKRGKRGKAQETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADV 61
Query: 282 IEGKSFRS 305
+ G+ F +
Sbjct: 62 LRGRVFEA 69
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 120 bits (288), Expect = 6e-26
Identities = 61/165 (36%), Positives = 95/165 (57%)
Frame = +1
Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
M+KK QTLIE ++ ++ DGY+LR+F I F Q KT YAQ + ++ IRK + EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 622 ITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVK 756
+ V+ +++ +S+ I +PL + VK
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVK 215
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 119 bits (286), Expect = 1e-25
Identities = 63/136 (46%), Positives = 76/136 (55%)
Frame = +1
Query: 349 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTXDGYVLRVFCI 528
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKT DGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 529 GFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTXSEXXEVVNXLIPDSIXXXIXXX 708
F K Q YAQ T ++ +R + E++ V + VV LIPDSI
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 709 XHGXYPLXXVCXXXVK 756
+PL VK
Sbjct: 126 ASSIFPLSGALVRKVK 141
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 101 bits (242), Expect = 2e-20
Identities = 67/166 (40%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Frame = +1
Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGF-XNKDSLSQXKTCYAQXTXVRAIRKXMCE 618
V KWQ ++EA+ DVKT D Y+L +FC+G+ N + + AQ V I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 619 IITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVK 756
I+ T + EV+N L+PD++ + YPL V VK
Sbjct: 156 IMDQRRT--DLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVK 199
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 92.3 bits (219), Expect = 1e-17
Identities = 51/156 (32%), Positives = 80/156 (51%)
Frame = +1
Query: 289 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 468
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 469 IEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTXSE 648
IEA D+ DG V RVF +G + KTCY + + + IRK M ++I ++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 649 XXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVK 756
+++ L +++ I +PL C VK
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVK 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/120 (32%), Positives = 64/120 (53%)
Frame = +1
Query: 265 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 444
++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGS 112
Query: 445 MVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEII 624
+ +K I+ +D+ T DGY+LRVF I F ++ + K C+ + +R +R + E +
Sbjct: 113 LFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETL 172
Score = 33.9 bits (74), Expect = 5.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 168 PFTRKXWYXVKAPSMFSKXQVGTTLVNRTQG 260
P+ +K WY V AP+ F +G T V +T G
Sbjct: 21 PYLKKEWYPVIAPAHFKSRHIGQTPVTKTAG 51
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 77.8 bits (183), Expect = 3e-13
Identities = 47/87 (54%), Positives = 59/87 (67%)
Frame = +1
Query: 241 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 420
L T + TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 421 LTTDKLRWMVKKWQTLIEANIDVKTXD 501
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3
Query: 123 LSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNE 266
L+ GG G +V PF++K WY V AP+MF+ +G TLV RTQG +
Sbjct: 9 LTKGGKKGAKKKVVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTK 56
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = +1
Query: 598 IRKXMCEIITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
IRK M EI+T V ++ EVVN LIPDSI + YPL V VK +F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 77.4 bits (182), Expect = 4e-13
Identities = 45/145 (31%), Positives = 74/145 (51%)
Frame = +1
Query: 265 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 444
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 445 MVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEII 624
+++K++T+I+A++D KT DG++LR+F IGF K + S YA R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 625 TXXVTXSEXXEVVNXLIPDSIXXXI 699
T + ++ + + I I
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEI 193
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 77.0 bits (181), Expect = 6e-13
Identities = 44/161 (27%), Positives = 75/161 (46%)
Frame = +1
Query: 274 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 453
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 454 KWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXX 633
KW TLIE ++ KT DGY L++F I K + KT Y + RA+R+ + +II
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 634 VTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVK 756
+ + ++ + I I +P+ V +K
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIK 212
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +1
Query: 241 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 420
L T + TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 421 LTTD 432
L+ D
Sbjct: 105 LSCD 108
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +3
Query: 144 GVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNENCFGRIEGKSF 299
G V ++K WY +KAP+MF+ +G TLV RTQG + ++G F
Sbjct: 16 GAKKKAVDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 55.2 bits (127), Expect = 2e-06
Identities = 41/150 (27%), Positives = 68/150 (45%)
Frame = +1
Query: 289 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 468
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 469 IEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTXSE 648
I+AN+ V T DG+ +RV I K A+ + + +IR+ M ++
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 649 XXEVVNXLIPDSIXXXIXXXXHGXYPLXXV 738
E +N ++ + I YPL V
Sbjct: 153 FTEFINEVVTGKVASEIYKNTKNIYPLRRV 182
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 53.2 bits (122), Expect = 8e-06
Identities = 42/150 (28%), Positives = 66/150 (44%)
Frame = +1
Query: 289 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 468
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 469 IEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTXSE 648
I+ +V+T DGY +RV + ++ S KT IRK + E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 649 XXEVVNXLIPDSIXXXIXXXXHGXYPLXXV 738
E V +I D + YP+ +
Sbjct: 158 FSEYVKYIISDDAPRELSKELKVIYPVRRI 187
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 52.0 bits (119), Expect = 2e-05
Identities = 43/152 (28%), Positives = 71/152 (46%)
Frame = +1
Query: 283 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 462
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 463 TLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTX 642
+ I+AN+DV+T DG+V+RV F K A+ + ++AIR+ M +I+ +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 643 SEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXV 738
++ + I + I YPL V
Sbjct: 152 TDFETFMQEAILGRLSAAIYRQAKFIYPLRRV 183
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +1
Query: 292 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 471
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 472 EANIDVKTXDGYVLRVFCIG 531
A +VKT DG V+R+ +G
Sbjct: 113 TAITEVKTKDGMVMRIAVLG 132
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 50.8 bits (116), Expect = 4e-05
Identities = 39/150 (26%), Positives = 65/150 (43%)
Frame = +1
Query: 289 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 468
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 469 IEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTXSE 648
IE +DV T DGY LRV + F ++ + KT + RAIR M +I+ +
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVF----TVRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 649 XXEVVNXLIPDSIXXXIXXXXHGXYPLXXV 738
+ + + + I YP+ V
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKKIYPIRRV 186
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 48.0 bits (109), Expect = 3e-04
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Frame = +1
Query: 277 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 456
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 457 WQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXV 636
+ I+ IDV T DGY +RV + F T A+ + RAIRK M ++I
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAF---------TTRRAKTSQQRAIRKEMFKVIEENA 142
Query: 637 TXSEXXEVVNXLI----PDSIXXXIXXXXHGXYPL 729
+ E + + +SI I YP+
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPI 177
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 46.8 bits (106), Expect = 7e-04
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 4/156 (2%)
Frame = +1
Query: 283 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 462
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 463 TLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTX 642
+ + +V T DGY LRV + F + + K+ AIRK M EI+
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTSQKS---------AIRKVMQEIVEQKARE 148
Query: 643 SEXXEVVNXLI----PDSIXXXIXXXXHGXYPLXXV 738
S E++ ++ S+ I YPL V
Sbjct: 149 STLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKV 184
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 283 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 462
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 463 TLIEANIDVKTXDGYVLRV 519
+ I A ++V+T DG+ +RV
Sbjct: 107 SKINAIVEVRTKDGFKVRV 125
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/83 (28%), Positives = 47/83 (56%)
Frame = +1
Query: 271 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 450
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 451 KKWQTLIEANIDVKTXDGYVLRV 519
++++ I+ IDV T DGY++R+
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRI 130
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 41.9 bits (94), Expect = 0.019
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +1
Query: 289 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 468
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 469 IEANIDVKTXDGYVLRV 519
I +D+ T DG+ LRV
Sbjct: 108 INKVVDITTKDGFTLRV 124
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 41.1 bits (92), Expect = 0.034
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = +1
Query: 286 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 465
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 466 LIEANIDVKTXDGYVLRV 519
+ +DVKT DGYV R+
Sbjct: 102 KVNYIVDVKTSDGYVFRL 119
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 41.1 bits (92), Expect = 0.034
Identities = 33/150 (22%), Positives = 62/150 (41%)
Frame = +1
Query: 289 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 468
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 469 IEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTXSE 648
+EA I V T D Y +++ + K A + +AIR+ M +++
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 649 XXEVVNXLIPDSIXXXIXXXXHGXYPLXXV 738
++++ ++ + I YPL V
Sbjct: 151 FEQLIDSVVEGRLSSAIYGEAKDIYPLRRV 180
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 40.7 bits (91), Expect = 0.045
Identities = 36/150 (24%), Positives = 61/150 (40%)
Frame = +1
Query: 289 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 468
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 469 IEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTXSE 648
+EA+I V T D Y +RV + K A + +AIR+ M + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 649 XXEVVNXLIPDSIXXXIXXXXHGXYPLXXV 738
V+ ++ ++ I YPL V
Sbjct: 151 FESFVDAIVEGNLSSAIYGDAKLIYPLRRV 180
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 36.7 bits (81), Expect = 0.72
Identities = 31/152 (20%), Positives = 64/152 (42%)
Frame = +1
Query: 283 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 462
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 463 TLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEIITXXVTX 642
+ I+A+ VKT D +++ + + + S + + +R+ + +++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQ---------KYMRQVINDLLAETAAE 152
Query: 643 SEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXV 738
E++ ++ + + YPL V
Sbjct: 153 KSFDELIKLVVNGKLASEVYHNAKKIYPLKRV 184
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 35.9 bits (79), Expect = 1.3
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +1
Query: 277 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 456
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 457 WQTLIEANIDV 489
+ +++ I V
Sbjct: 101 RASRVDSTITV 111
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 35.1 bits (77), Expect = 2.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTT 239
AVG G G ++ F++K WY VKA +MF+ +G T
Sbjct: 2 AVGKNKCFMKGSKKGAKKKVIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 33.5 bits (73), Expect = 6.8
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = -3
Query: 482 MLASMRVCHFLTIHLSLSVVRSXPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 303
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRV----DEAWKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 302 SKTLPFNPSEAIFVXLG-TVDKRGADLPLAE-HRRSLDXVPXF 180
++ + E + G T+D+ A + L H+ + D + F
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNLPRLHQYNDDKITLF 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,878,727
Number of Sequences: 1657284
Number of extensions: 8397262
Number of successful extensions: 18661
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 18224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18645
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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