Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O01
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524...   174   6e-44
02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221...   173   2e-43
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120...   172   3e-43
04_03_0983 + 21423086-21423280,21423330-21423404,21423531-214236...    28   8.1  

>03_02_0043 +
           5242496-5242554,5242673-5242778,5243586-5243723,
           5243794-5243979,5244075-5244275,5244362-5244460
          Length = 262

 Score =  174 bits (424), Expect = 6e-44
 Identities = 91/172 (52%), Positives = 113/172 (65%)
 Frame = +1

Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
           TKIASEGLK RVFEVSLADLQ D D  +++RK RL AE VQG+NVL NF GM  TTDKLR
Sbjct: 54  TKIASEGLKHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLR 111

Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
            +VKKWQTLIEA++DVKT DGY+LR+FCIGF  +      +TCYAQ + +R IR+ M EI
Sbjct: 112 SLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEI 171

Query: 622 ITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
           +    +  +  E+V+  IP+ I   I       +PL  V    VK     +F
Sbjct: 172 MANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKF 223



 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 25/55 (45%), Positives = 33/55 (60%)
 Frame = +3

Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNE 266
           AVG    +S G   G     V PF +K WY +KAPS+F+   +G TLV+RTQG +
Sbjct: 2   AVGKNKRISKG-KKGSKKKTVDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTK 55


>02_02_0482 -
           10819562-10819813,10820773-10820952,10822073-10822150,
           10823056-10823256,10823365-10823550,10823646-10823783,
           10824396-10824501,10824634-10824692
          Length = 399

 Score =  173 bits (420), Expect = 2e-43
 Identities = 91/172 (52%), Positives = 112/172 (65%)
 Frame = +1

Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
           TKIASEGLK RVFEVSLADLQ D D  +++RK RL AE VQGRNVL NF GM  TTDKLR
Sbjct: 54  TKIASEGLKHRVFEVSLADLQNDED--QAYRKVRLRAEDVQGRNVLTNFWGMSFTTDKLR 111

Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
            +VKKWQTLIEA++DVKT D Y+LR+FCIGF  +      +TCYAQ + +R IR+ M EI
Sbjct: 112 SLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEI 171

Query: 622 ITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
           +    +  +  E+V+  IP+ I   I       +PL  V    VK     +F
Sbjct: 172 MANQASTCDLKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKILKAPKF 223



 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 25/55 (45%), Positives = 34/55 (61%)
 Frame = +3

Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNE 266
           AVG    +S G   G     V PF++K WY +KAP++FS   +G TLV+RTQG +
Sbjct: 2   AVGKNKRISKG-RKGSKKKTVDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTK 55


>12_02_0012 -
           12309332-12310228,12311087-12311669,12311945-12312051,
           12313190-12313237,12315139-12315216,12315300-12315500,
           12315612-12315797,12315870-12316007,12318311-12318416,
           12318529-12318587
          Length = 800

 Score =  172 bits (418), Expect = 3e-43
 Identities = 90/172 (52%), Positives = 112/172 (65%)
 Frame = +1

Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
           TKIASEGLK RVFEVSLADLQ D D  +++RK RL AE VQG+NVL NF GM  TTDKLR
Sbjct: 54  TKIASEGLKHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLR 111

Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
            +VKKWQTLIEA++DVKT D Y+LR+FCIGF  +      +TCYAQ + +R IR+ M EI
Sbjct: 112 SLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEI 171

Query: 622 ITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVKXXXXXRF 777
           +    +  +  E+V+  IP+ I   I       +PL  V    VK     +F
Sbjct: 172 MVNQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKF 223



 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 26/55 (47%), Positives = 33/55 (60%)
 Frame = +3

Query: 102 AVGXXXGLSXGGXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNE 266
           AVG    +S G   G     V PF +K WY +KAPS+F+   VG TLV+RTQG +
Sbjct: 2   AVGKNKRISKG-KKGSKKKTVDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTK 55


>04_03_0983 +
           21423086-21423280,21423330-21423404,21423531-21423632,
           21423721-21423774,21423880-21423972,21424526-21424618,
           21427329-21427433,21427517-21427615,21427701-21427997,
           21428512-21428622
          Length = 407

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -3

Query: 440 LSLSVVRSXPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARETSK 297
           +++  +R+ PW L++  R  T +A  +  +KD SA   + +S  E  K
Sbjct: 274 ITIREIRNHPWFLKNLPRELTEAAQAMYYKKDNSAPTYSVQSVEEIMK 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,994,876
Number of Sequences: 37544
Number of extensions: 247883
Number of successful extensions: 557
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)