Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_O01
         (841 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   162   2e-40
Z66497-4|CAA91284.1|  401|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  162 bits (394), Expect = 2e-40
 Identities = 91/165 (55%), Positives = 102/165 (61%)
 Frame = +1

Query: 262 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 441
           TKIASEGLKGRVFEVSL DL    ++E  FRKF+LIAE VQG+NVL NFH M +T DKL 
Sbjct: 53  TKIASEGLKGRVFEVSLGDLN---NSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLC 109

Query: 442 WMVKKWQTLIEANIDVKTXDGYVLRVFCIGFXNKDSLSQXKTCYAQXTXVRAIRKXMCEI 621
            +VKKW TLIEAN  VKT DGY LRVF I F  K      KT Y + + +R IR  M   
Sbjct: 110 SIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGC 169

Query: 622 ITXXVTXSEXXEVVNXLIPDSIXXXIXXXXHGXYPLXXVCXXXVK 756
           I   VT  +  EVV+ LIPDSI   I       YPL  V    VK
Sbjct: 170 IEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVK 214



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 26/55 (47%), Positives = 35/55 (63%)
 Frame = +3

Query: 135 GXXGVXXXLVXPFTRKXWYXVKAPSMFSKXQVGTTLVNRTQGNENCFGRIEGKSF 299
           G  G     V PF+RK WY +KAP+MF+  QVG TL+NRTQG +     ++G+ F
Sbjct: 11  GKKGGKKKAVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVF 65


>Z66497-4|CAA91284.1|  401|Caenorhabditis elegans Hypothetical
           protein K08F8.2 protein.
          Length = 401

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = -3

Query: 479 LASMRVCHFLTIHLSLSVVRSXPWKLQ-STLRPCTY-SAINLNLRKDLSASVSACRSARE 306
           +AS++    LT+ L L      P  LQ   L+P T  S +  + ++  S S S+  S+  
Sbjct: 132 IASLQASSMLTVPL-LQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTSASSLFSSSS 190

Query: 305 TSKTLPFNPSEA 270
           +S   PF PSE+
Sbjct: 191 SSAFHPFRPSES 202


>Z69634-5|CAA93456.1|  731|Caenorhabditis elegans Hypothetical
           protein B0001.7 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 283 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 393
           L+G  + +S+ D +A TD E S +  R IAE+++ R+
Sbjct: 201 LRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,222,348
Number of Sequences: 27780
Number of extensions: 202787
Number of successful extensions: 409
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)