Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_N23
(908 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 37 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.011
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.011
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 35 0.018
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.042
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.17
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.39
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.39
SPAC323.05c |||S-adenosylmethionine-dependent methyltransferase ... 28 1.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.7
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 27 4.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.5
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 195 WVREFAIRSSALAQQSTYSKRLKD*STVLNQRKTNKIR*SVVVEQSEIER*SFKKKYHXK 374
++R F RSS ++ S K ++D +R+T + + V+EQ ++ K+ H
Sbjct: 605 FIRSFTFRSSNNSRMSQVFKDIQDMKKAATKRETERKEFADVIEQDKLIEIKNKRPAHIN 664
Query: 375 DVIVRP 392
DV VRP
Sbjct: 665 DVYVRP 670
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.1 bits (82), Expect = 0.003
Identities = 22/55 (40%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +1
Query: 685 PXPPXXPPXXXAPXXPPPXXXPXXPXXXP--PPXPPXXPXXXXPPXXXPXPXXPP 843
P PP PP AP PP P P P PP PP P PP P PP
Sbjct: 418 PTPPSLPPS--APPSLPPSAPPSLPMGAPAAPPLPPSAP--IAPPLPAGMPAAPP 468
Score = 31.9 bits (69), Expect = 0.13
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 8/74 (10%)
Frame = +1
Query: 643 PXXXPXXXPXXXXXPXPPXXPP--XXXAPXXPP-PXXXPXXP-----XXXPPPXPPXXPX 798
P P P PP PP AP PP P P P PP PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP- 474
Query: 799 XXXPPXXXPXPXXP 840
PP P P P
Sbjct: 475 -APPPAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +1
Query: 694 PXXPPXXXAPXXPPPXXXPXXPXXXPPP-XPPXXPXXXXPPXXXPXPXXPPXXXP 855
P PP P PP P PPP PP PP P P P P
Sbjct: 230 PPIPPSI--PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +1
Query: 694 PXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
P P P PP P P P P P P P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 29.1 bits (62), Expect = 0.91
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = +1
Query: 643 PXXXPXXXPXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXX 822
P P P PP PP AP P PPP
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 823 PXPXXPP 843
P P PP
Sbjct: 311 PPPPPPP 317
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 685 PXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
P PP P AP PP P P PP P P P P P
Sbjct: 389 PAPPPAIPGRSAPALPP-LGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 2/69 (2%)
Frame = +1
Query: 655 PXXXPXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXP--PPXPPXXPXXXXPPXXXPX 828
P P PP PP P P P PP P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 829 PXXPPXXXP 855
P P P
Sbjct: 476 PPPAPAPAP 484
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXP----XXXXPPXXXPXPXXPP 843
PP PP PP PPP PP PP P PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXP 795
PP P AP PPP P PP P P
Sbjct: 241 PPERVPSLSAP-APPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 4/71 (5%)
Frame = +1
Query: 655 PXXXPXXXXXPXPPXXPPXXXAPXXP-PP-XXXPXXPXXXPPPXPPXXP--XXXXPPXXX 822
P P P PP A PP P P PP PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 823 PXPXXPPXXXP 855
P P P P
Sbjct: 448 PLPPSAPIAPP 458
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +1
Query: 685 PXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
P P PP A P P P P PPP P P PP P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP-VKSPPSAPSLPSAVPPMPP 199
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 5/52 (9%)
Frame = +1
Query: 703 PPXXXAPXXP-----PPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPP 843
PP AP P PP P P PPP P P P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRP-SIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Frame = +1
Query: 685 PXPPXXPP-XXXAPXXP---PPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXP 831
P P PP AP P PP P P PP P P P P
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.011
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
PP P P PPP P P PP P PP P PP P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVP-KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 34.7 bits (76), Expect = 0.018
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
PP P AP P P P P P P PP P PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 32.3 bits (70), Expect = 0.098
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
PP P P PPP P P P P PP P P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
PP P AP P P P P PP PP P PP P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVP-KPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 3/58 (5%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXX---PPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
PP AP PPP P P PP PP P PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
PP P P P P P P PP PP P PP P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVP-KPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 4/61 (6%)
Frame = +1
Query: 685 PXPPXXPPXXXAPXXPPPXXXP--XXPXXXPPP--XPPXXPXXXXPPXXXPXPXXPPXXX 852
P P PP PP P P P PP P PP P PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 853 P 855
P
Sbjct: 1213 P 1213
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 694 PXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
P P AP P P P P P P PP P PP P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP-SGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXP-XXXPPPXPPXXPXXXXPPXXXPXP 831
PP P AP P P P P PP P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXX----PXXPXXXPP-PXPPXXPXXXXPPXXXPXPXXPPXXXP 855
PP P AP P P P PP P P P P P P PP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP-PVPPPSTAP 1217
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 685 PXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
P P P AP PP P PP P P PP P PP P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAP----SGIPPVP--KPSVAAPPVPKPSVAVPPVPAP 1117
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 34.7 bits (76), Expect = 0.018
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +1
Query: 667 PXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXP 840
P P PP P P P P P P P PP P P P P
Sbjct: 569 PEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVP 626
Score = 33.9 bits (74), Expect = 0.032
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +1
Query: 601 PXXPTAXXXXXXXXPXXXPXXXPXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPX 780
P P P P P P PP P AP P P P P P
Sbjct: 563 PAVPVVPEALSVPQPPVAPVA-PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQ 621
Query: 781 PPXXPXXXXPPXXXPXPXXP 840
P P P P P
Sbjct: 622 RPAVPVVPEAPSVPQPPAAP 641
Score = 33.5 bits (73), Expect = 0.042
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +1
Query: 601 PXXPTAXXXXXXXXPXXXPXXXPXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPX 780
P P A P P P P PP P P P P P P
Sbjct: 578 PVAPVAPEVPSVPQPPVAPVV-PEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQ 636
Query: 781 PPXXPXXXXPPXXXPXPXXP 840
PP P P P P
Sbjct: 637 PPAAPVVPEVPSVPQRPAVP 656
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +1
Query: 667 PXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXP 840
P P PP P P P P P P PP P P P P
Sbjct: 629 PEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +1
Query: 667 PXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXP 840
P P P P A P P P P P PP P P P P
Sbjct: 554 PEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.042
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 718 APXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXP 831
+P PPP P P P PP P PP P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 32.7 bits (71), Expect = 0.074
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 685 PXP-PXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXP 795
P P P PP PPP P PPP PP P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 5/52 (9%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPP-----PXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXP 831
PP PP P P P P PPP PP PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 667 PXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPP 786
P P PP P P PPP PPP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +1
Query: 601 PXXPTAXXXXXXXXPXXXPXXXPXXXXXPXPPXXPPXXXAPXXPPPXXXP 750
P P P P P P PP P A PPP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 854 GXXXGGXXGXGXXXGGXXXXGXXGGXGGGXXXGXXGXXXGGGXXG 720
G G G G G G GG GGG G G GG G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 29.9 bits (64), Expect = 0.52
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -1
Query: 842 GGXXGXGXXXGGXXXXGXXGGXGGGXXXGXXGXXXGGGXXGAXXXGGXXGG 690
GG G G GG GGG G G GG G GG GG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG--FRGGSRGG 189
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/61 (26%), Positives = 16/61 (26%)
Frame = +1
Query: 643 PXXXPXXXPXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXX 822
P P P P P PPP P P P PP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 823 P 825
P
Sbjct: 1746 P 1746
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 706 PXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
P P P P PPP P P PP P P PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP---PPSAPPMPAGPPSAPP 1732
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +1
Query: 703 PPXXXAPXXPPPXXXPXXPXXXPP--PXPPXXPXXXXPPXXXPXPXXP 840
PP AP PPP P PP PP P P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 691 PPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPPXXPXXXXPPXXXPXP 831
PP P P P P PPP P P PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = +3
Query: 603 TXXXXPXXXXXPXXXXXXXPXXPXXXXPXPPXXPXPXXXPXXPXPXXPXXPPP 761
T P P P P P P P P P P P P P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 703 PPXXXAPXXPPPXXXPXXPXXXPPPXPP 786
PP P PPP P P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEP--PSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 685 PXPPXXPPXXXAPXXPPPXXXP 750
P PP PP P PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 757 PXXXPPPXPPXXPXXXXPPXXXPXPXXP 840
P PPP PP P PP P P P
Sbjct: 5 PPGNPPPPPP--PPGFEPPSQPPPPPPP 30
>SPAC323.05c |||S-adenosylmethionine-dependent methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 34 GTPLMIFDSSLIDSVEPTSRFENVFYKNSIYRHHLHNDCEL 156
GT M S+L++ ++ + VFY ++ R+ LH+ CE+
Sbjct: 155 GTDGMDVTSTLLNQLKDILSQDGVFYMVAVARNKLHSICEI 195
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 769 PPPXPPXXPXXXXPPXXXPXPXXPPXXXP 855
PPP PP PP P PP P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2
Query: 163 GSTAHNH-YANDGDKYYFCKIHF 98
G ++H + + ND ++Y+CK HF
Sbjct: 200 GFSSHTYKFVNDKGEFYYCKWHF 222
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 667 PXXXXXPXPPXXPPXXXAPXXPPPXXXPXXPXXXPPPXPP 786
P P P PP AP P P PPP PP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPP---PPPPPP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,792,236
Number of Sequences: 5004
Number of extensions: 30731
Number of successful extensions: 309
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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