Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_N22
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1074 + 30168065-30168577 35 0.10
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 33 0.23
10_07_0039 - 12269928-12270103,12270871-12271015,12271066-122710... 33 0.31
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 33 0.41
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 31 0.94
08_02_0146 - 13195691-13196658,13197613-13197809,13198002-131984... 30 2.2
01_06_0789 - 32010131-32010330,32010438-32010866,32011658-320117... 30 2.2
04_04_0368 + 24741755-24741970,24742415-24742811,24742892-247431... 30 2.9
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 30 2.9
09_03_0040 + 11816056-11819069,11819837-11820428 29 5.0
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 29 5.0
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335 29 5.0
08_02_0154 - 13324384-13325351,13326306-13326502,13326695-133272... 29 6.7
03_01_0381 - 2960533-2960805 29 6.7
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 29 6.7
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000... 28 8.8
>03_05_1074 + 30168065-30168577
Length = 170
Score = 34.7 bits (76), Expect = 0.10
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -2
Query: 547 LHAAAQQRPQRLQHRAARLVRVEVADECDSDGPRVVP--VGVRADVQPAGALVHLAVTSH 374
L AA ++RP + + AA VR A D DGP V P AD + AG + T
Sbjct: 95 LPAAMRRRPLQAEEMAALAVRASAALVGDHDGPLVFPEAAASAADPRAAGKGCRRSRTRR 154
Query: 373 QERGSD-VPVL 344
RG D VP L
Sbjct: 155 HSRGRDFVPDL 165
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 332 CGWSGYSAPAPRSQRPSCR 276
CG+ GYS PAP++ RPSCR
Sbjct: 63 CGY-GYSTPAPKAPRPSCR 80
>10_07_0039 -
12269928-12270103,12270871-12271015,12271066-12271094,
12271394-12271478
Length = 144
Score = 33.1 bits (72), Expect = 0.31
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 205 DPGARVVPGAAREPRHRPAHSHTL 276
D G R VPG + PRHRP H T+
Sbjct: 81 DGGRRAVPGQSTVPRHRPRHDPTI 104
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 32.7 bits (71), Expect = 0.41
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Frame = +2
Query: 290 AGCEELVRNIQTNHMEALQYWDIGPSFL---VGGNGKVYEGSGWLHVGAHTYGYNSRSIG 460
AG + ++ + E++ + G SF+ +GG G+++ G W + Y S S
Sbjct: 365 AGVRTITGSVTAHARESVDD-NTGYSFVNCSIGGTGRIWLGRAWRPYSTVVFAYTSMSDI 423
Query: 461 VAFIGNFNTDEPS----GAMLEALRSLLRCGVERGXLAGDYRVXG 583
+A G + ++PS + L ++ S++ C +R G+YR G
Sbjct: 424 IASEGWNDWNDPSRDQYASSLYSV-SIVTCMTKRTVFYGEYRCTG 467
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.5 bits (68), Expect = 0.94
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = -3
Query: 567 SPAXWPRSTPQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTL 388
SP+ P S+ + S + S +P S + N +P P +P+ SQP PSY+
Sbjct: 1743 SPSYNP-SSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSP--TSPSYSQPSPSYSP 1799
Query: 387 PLPPTRNEGPMSQYCKAS 334
P T + GP Y S
Sbjct: 1800 TSPYTTSGGPSPDYSPTS 1817
>08_02_0146 -
13195691-13196658,13197613-13197809,13198002-13198479,
13199660-13199782,13200139-13200466
Length = 697
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -2
Query: 235 PRQVRHVH--RDQTVPLLFTDDVAIGCYFCEKRAESEREYNCRVEAGPCR 92
P V H++ R+ T+PL ++ +G + E R + E C + PCR
Sbjct: 566 PNVVYHLYNCRELTIPLQTIEESRVGGAYRETRNMTRNELECSSSSTPCR 615
>01_06_0789 -
32010131-32010330,32010438-32010866,32011658-32011752,
32011836-32011933,32012586-32012942,32013615-32013792,
32013856-32013936,32014441-32014548,32014916-32015178
Length = 602
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 451 PRVVPVGVRADVQPAGALVHLAVTSHQE-RGSDVPVLQGLHVVGLDIPHQLLAASV 287
PR VPVG QP HL V Q+ +PV++ HVV + +P +A +V
Sbjct: 14 PRAVPVGFP---QPQQLRAHLPVGVPQQLHPRGLPVMRSHHVVHVPLPRPAVAVAV 66
>04_04_0368 +
24741755-24741970,24742415-24742811,24742892-24743187,
24743860-24744096
Length = 381
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = +1
Query: 208 PGARVVPGAAREPRHRPAHSHTL-----LQDGRWLRGAGAEYPDQPHGGLAILGHRTLVP 372
P + P A P HR HSH + G G P++ HG LA++ L+P
Sbjct: 178 PEGNLPPSDATLPMHRSMHSHAFNYTSGMASSSGGSGGGGFPPERKHGLLAMMAWGVLMP 237
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/82 (30%), Positives = 37/82 (45%)
Frame = -3
Query: 309 TSSSQPASVLQKGVTVCWTMTRLTGRARYDTCTGIKPSHCFLLTTSQSAAISVRSELRAS 130
TS+S A++ + T RL + + +PS ++ +S S RS LRAS
Sbjct: 35 TSASASAAMQMQAATTTTAARRLAPKPQ-PQANRCRPSSVSVVAAGRSRRRSARSSLRAS 93
Query: 129 ASTTAEWRQGHVEERRVPSTVK 64
AS E V+ER P+ K
Sbjct: 94 ASLDQE-----VKERASPAAGK 110
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 534 RSSDRSASSIAPLGSSVLKLPMNATPMDL 448
R R+AS++A G+S+ +LP+ ATP+ +
Sbjct: 301 RDCGRAASTLAESGASMEELPLEATPISV 329
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = +3
Query: 300 RSWCGISRPTTWRPCNTGTSD-----PRSWWEVTARCTRAPAGCTSARTPTGTTRGPSES 464
R W SR + R C+ + P WW AR RAP A PS S
Sbjct: 20 RPWTAASRGVSARRCSVAPAQVRARGPTEWWPAAARRRRAPRRHAVAAKAGAADARPSSS 79
>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
Length = 377
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 235 PRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 125
P+ VR V R +TVP+ +TD A G EK E E E
Sbjct: 120 PKFVR-VLRPKTVPIRYTDTFASGTVALEKELEKEFE 155
>08_02_0154 -
13324384-13325351,13326306-13326502,13326695-13327274,
13328324-13328446,13328803-13329130
Length = 731
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 235 PRQVRHVH--RDQTVPLLFTDDVAIGCYFCEKRAESEREYNCRVEAGPCR 92
P V H++ R+ T+PL ++ G + E R + E C + PCR
Sbjct: 600 PNVVYHLYNCRELTIPLQTIEESRAGGAYRETRNMTRNELECSSSSTPCR 649
>03_01_0381 - 2960533-2960805
Length = 90
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 226 VRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 125
+R R +TVP+ +TD A G EK E E E
Sbjct: 1 MRRSQRPKTVPIRYTDTFASGTIALEKELEKEFE 34
>01_03_0303 +
14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 360 PMSQYCKASMWLVWIFRTSSSQPASV-LQKGVTVCWTMTRLTGRAR 226
P+ +YC +W +WI ++ QP V Q+ + W+ GRA+
Sbjct: 816 PLVKYCPPELWRMWI--SNLLQPLFVHCQQALDFSWSSLLREGRAK 859
>03_06_0614 -
35099225-35099461,35099545-35099694,35099919-35100066,
35100152-35100231,35100428-35100594,35100692-35100940,
35101025-35102310,35102423-35102544,35102946-35103272
Length = 921
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -3
Query: 384 LPPTRNEGPMSQYCKASMWLVWIFRTSSSQPASVLQKGVTVCWTMTRLT 238
LP T + G S K S + R SSS +S +QK V+VC T T T
Sbjct: 381 LPRTGHSGRSSGGSKRSFGAKGLIRRSSSF-SSDIQKDVSVCTTTTEQT 428
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,537,930
Number of Sequences: 37544
Number of extensions: 433325
Number of successful extensions: 1955
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1952
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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