Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_N17
(962 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.002
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.002
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.002
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.025
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.025
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.025
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 36 0.033
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.075
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.075
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 35 0.099
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.40
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.92
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.2
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.6
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +2
Query: 704 PPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPX 883
PP P P G P P P G P P P PP P P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPP----PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 884 XXXXXXXPPXXXPPP 928
PP PPP
Sbjct: 763 PPPGGCPPPPPPPPP 777
Score = 31.5 bits (68), Expect = 0.92
Identities = 26/95 (27%), Positives = 26/95 (27%)
Frame = +2
Query: 650 PXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRP 829
P PP P P PP P G P P P G P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP--PGGLPPITGGPPPPP----PPGGLPPISGGPPP 760
Query: 830 XPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
PP P P PP PPP P
Sbjct: 761 PPP-----PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 834 PPXXPXXRXXAXPXPPPGXXXXXPPRXXPP 923
PP P P PPPG PP PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/85 (23%), Positives = 22/85 (25%)
Frame = +2
Query: 509 PXXXGXXXXXXCXPXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXX 688
P G P P P G + + P P P PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 689 XPXRXPPXXXPPXAPXGXXPXPXXP 763
P PP PP G P P P
Sbjct: 768 CP--PPPPPPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = +2
Query: 566 GPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXX 745
GP P G P P P PP PP PP P G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCP 769
Query: 746 PXPXXPXXXXXXXXPXXGXXPRXXXP 823
P P P P P P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +2
Query: 704 PPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPX 883
PP P P G P P P G P P P PP P P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPP----PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 884 XXXXXXXPPXXXPPP 928
PP PPP
Sbjct: 763 PPPGGCPPPPPPPPP 777
Score = 31.5 bits (68), Expect = 0.92
Identities = 26/95 (27%), Positives = 26/95 (27%)
Frame = +2
Query: 650 PXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRP 829
P PP P P PP P G P P P G P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP--PGGLPPITGGPPPPP----PPGGLPPISGGPPP 760
Query: 830 XPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
PP P P PP PPP P
Sbjct: 761 PPP-----PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 834 PPXXPXXRXXAXPXPPPGXXXXXPPRXXPP 923
PP P P PPPG PP PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/85 (23%), Positives = 22/85 (25%)
Frame = +2
Query: 509 PXXXGXXXXXXCXPXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXX 688
P G P P P G + + P P P PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 689 XPXRXPPXXXPPXAPXGXXPXPXXP 763
P PP PP G P P P
Sbjct: 768 CP--PPPPPPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = +2
Query: 566 GPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXX 745
GP P G P P P PP PP PP P G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCP 769
Query: 746 PXPXXPXXXXXXXXPXXGXXPRXXXP 823
P P P P P P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +2
Query: 704 PPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPX 883
PP P P G P P P G P P P PP P P PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPP----PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Query: 884 XXXXXXXPPXXXPPP 928
PP PPP
Sbjct: 346 PPPGGCPPPPPPPPP 360
Score = 31.5 bits (68), Expect = 0.92
Identities = 26/95 (27%), Positives = 26/95 (27%)
Frame = +2
Query: 650 PXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRP 829
P PP P P PP P G P P P G P P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPP--PGGLPPITGGPPPPP----PPGGLPPISGGPPP 343
Query: 830 XPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
PP P P PP PPP P
Sbjct: 344 PPP-----PPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 834 PPXXPXXRXXAXPXPPPGXXXXXPPRXXPP 923
PP P P PPPG PP PP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/85 (23%), Positives = 22/85 (25%)
Frame = +2
Query: 509 PXXXGXXXXXXCXPXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXX 688
P G P P P G + + P P P PP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 689 XPXRXPPXXXPPXAPXGXXPXPXXP 763
P PP PP G P P P
Sbjct: 351 CP--PPPPPPPPGGFKGGPPPPPPP 373
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = +2
Query: 566 GPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXX 745
GP P G P P P PP PP PP P G
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--PGGCP 352
Query: 746 PXPXXPXXXXXXXXPXXGXXPRXXXP 823
P P P P P P
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPGMFAP 378
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.7 bits (81), Expect = 0.025
Identities = 30/130 (23%), Positives = 31/130 (23%), Gaps = 4/130 (3%)
Frame = +2
Query: 548 PXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPX 727
P G P P G +P P P P PP P PP P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPP 290
Query: 728 APXGXXPXPXXPXXXXXXXX----PXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPXXXXX 895
P P P P P G P PP PP
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
Query: 896 XXXPPXXXPP 925
PP PP
Sbjct: 351 TGSPPTGRPP 360
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 692 PXRXPPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXP 871
P PP PP A G P P P P P PP P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 872 XPPXXXXXXXXPPXXXPPP 928
PP PP PP
Sbjct: 296 SPPPPPPPRGSPPTGSLPP 314
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 798 AXXXGXPXXXXXPPXXPXXRXXAXPXPPPGXXXXXPPRXXPPXP 929
A G P P P P PPP PPR P P
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.025
Identities = 30/130 (23%), Positives = 31/130 (23%), Gaps = 4/130 (3%)
Frame = +2
Query: 548 PXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPX 727
P G P P G +P P P P PP P PP P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPP 311
Query: 728 APXGXXPXPXXPXXXXXXXX----PXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPXXXXX 895
P P P P P G P PP PP
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
Query: 896 XXXPPXXXPP 925
PP PP
Sbjct: 372 TGSPPTGRPP 381
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 692 PXRXPPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXP 871
P PP PP A G P P P P P PP P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 872 XPPXXXXXXXXPPXXXPPP 928
PP PP PP
Sbjct: 317 SPPPPPPPRGSPPTGSLPP 335
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 798 AXXXGXPXXXXXPPXXPXXRXXAXPXPPPGXXXXXPPRXXPPXP 929
A G P P P P PPP PPR P P
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.025
Identities = 30/130 (23%), Positives = 31/130 (23%), Gaps = 4/130 (3%)
Frame = +2
Query: 548 PXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPX 727
P G P P G +P P P P PP P PP P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPP 296
Query: 728 APXGXXPXPXXPXXXXXXXX----PXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPXXXXX 895
P P P P P G P PP PP
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
Query: 896 XXXPPXXXPP 925
PP PP
Sbjct: 357 TGSPPTGRPP 366
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/79 (26%), Positives = 21/79 (26%)
Frame = +2
Query: 692 PXRXPPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXP 871
P PP PP A G P P P P P PP P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 872 XPPXXXXXXXXPPXXXPPP 928
PP PP PP
Sbjct: 302 SPPPPPPPRGSPPTGSLPP 320
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 798 AXXXGXPXXXXXPPXXPXXRXXAXPXPPPGXXXXXPPRXXPPXP 929
A G P P P P PPP PPR P P
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 36.3 bits (80), Expect = 0.033
Identities = 31/125 (24%), Positives = 33/125 (26%), Gaps = 15/125 (12%)
Frame = +2
Query: 605 PXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXPXPXX-------P 763
P P P P P PP P + P PP AP P P
Sbjct: 30 PPPPKPAPYVEQSAQPQQTAPPPPPAPY-PQQAVPAPAPPPAPYPQHAVPAPAPPLASYP 88
Query: 764 XXXXXXXXPXXGXXPRXXXPRPXPPXXXXX--------PXXXXPXPPXXXXXXXXPPXXX 919
P P+ P P PP P P PP PP
Sbjct: 89 QNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHY 148
Query: 920 PPPXP 934
PPP P
Sbjct: 149 PPPPP 153
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/110 (23%), Positives = 26/110 (23%)
Frame = +2
Query: 605 PXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXPXPXXPXXXXXXX 784
P P P P P P PP P G P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 785 XPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
P P P PP P P PP P PPP P
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG--PGMYPPPPP 368
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/108 (25%), Positives = 27/108 (25%), Gaps = 1/108 (0%)
Frame = +2
Query: 614 PXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXPXPXXPXXXXXXXXPX 793
P P P P PP P P PP P P P P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGM--PGMPPPPPPSRFGP----PGMGGMPPPPP 338
Query: 794 XGXXPRXXXPRPXPP-XXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
G P P PP P P PP PPP P
Sbjct: 339 PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.075
Identities = 26/110 (23%), Positives = 26/110 (23%)
Frame = +2
Query: 605 PXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXPXPXXPXXXXXXX 784
P P P P P P PP P G P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 785 XPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
P P P PP P P PP P PPP P
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG--PGMYPPPPP 378
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/108 (25%), Positives = 27/108 (25%), Gaps = 1/108 (0%)
Frame = +2
Query: 614 PXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXPXPXXPXXXXXXXXPX 793
P P P P PP P P PP P P P P
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGM--PGMPPPPPPSRFGP----PGMGGMPPPPP 348
Query: 794 XGXXPRXXXPRPXPP-XXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
G P P PP P P PP PPP P
Sbjct: 349 PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 34.7 bits (76), Expect = 0.099
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = -3
Query: 933 GXGGGXXXGGXXXXXXXXGGXGXXXXGXXXXXGGXGRGXXXRGXXPXXGXXXXXXXXGXX 754
G GG GG GG G GG GRG G G G
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGG---GGGGGGGRGGGGGGRGGG 114
Query: 753 GXGXXPXGAXGGXXXGGXR 697
G G G GG GG R
Sbjct: 115 GGGGGGRGGGGGGRGGGGR 133
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 933 GXGGGXXXGGXXXXXXXXGGXGXXXXGXXXXXGGXGRG 820
G GGG GG GG G G GG GRG
Sbjct: 97 GGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 933 GXGGGXXXGGXXXXXXXXGGXGXXXXGXXXXXGGXGRG 820
G GGG GG GG G G GG GRG
Sbjct: 99 GGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/78 (30%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Frame = -3
Query: 933 GXGGGXXXGGXXXXXXXXGGXGXXXXGXXXXX-GGXGRGXXXRGXXPXXGXXXXXXXXGX 757
G G G GG GG G G GG G G RG G G
Sbjct: 52 GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRG-----GGGGGGGGRGG 106
Query: 756 XGXGXXPXGAXGGXXXGG 703
G G G GG GG
Sbjct: 107 GGGGRGGGGGGGGGRGGG 124
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/77 (32%), Positives = 25/77 (32%)
Frame = -3
Query: 933 GXGGGXXXGGXXXXXXXXGGXGXXXXGXXXXXGGXGRGXXXRGXXPXXGXXXXXXXXGXX 754
G GG GG GG G G GG GRG RG G G
Sbjct: 110 GGGGNWGGGG-----NNDGGWGGNNGGGGGGRGGGGRGGDGRG---PPGSNGGGDWGGNG 161
Query: 753 GXGXXPXGAXGGXXXGG 703
G G G GG GG
Sbjct: 162 GGGRGGGGGRGGGGGGG 178
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 827 PXPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
P PP P P PP PP PPP P
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 821 PRPXPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
P P PP P P P PP PPP P
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 821 PRPXPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
P P PP P P P PP PPP P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPP 68
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/75 (25%), Positives = 19/75 (25%)
Frame = +2
Query: 704 PPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPX 883
PP G P P P P P P P PP P PP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQ 739
Query: 884 XXXXXXXPPXXXPPP 928
P PPP
Sbjct: 740 PGHPYQQPYGQMPPP 754
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/75 (25%), Positives = 19/75 (25%)
Frame = +2
Query: 704 PPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPX 883
PP G P P P P P P P PP P PP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQ 739
Query: 884 XXXXXXXPPXXXPPP 928
P PPP
Sbjct: 740 PGHPYQQPYGQMPPP 754
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 821 PRPXPPXXXXXPXXXXPXPPXXXXXXXXPPXXXPPPXP 934
P P P P P PP PP PPP P
Sbjct: 485 PSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +2
Query: 704 PPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPX 883
P PP G P P P PR P P P P PP
Sbjct: 130 PSGPPPPSMAYGMPPMPSG--MMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPP 187
Query: 884 XXXXXXXPPXXXPPPXP 934
PP P P P
Sbjct: 188 RMPIGHGPPGGPPMPGP 204
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +2
Query: 704 PPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPPX 883
P PP G P P P PR P P P P PP
Sbjct: 130 PSGPPPPSMAYGMPPMPSG--MMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPP 187
Query: 884 XXXXXXXPPXXXPPPXP 934
PP P P P
Sbjct: 188 RMPIGHGPPGGPPMPGP 204
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/78 (28%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +2
Query: 704 PPXXXPP-XAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPPXXXXXPXXXXPXPP 880
PP PP + G P P P PR P PP P P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPR--RPPMTPPSPQRRP-PRTPPSP 178
Query: 881 XXXXXXXXPPXXXPPPXP 934
PP PPP P
Sbjct: 179 EPRNPPRTPPSPIPPPPP 196
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.5
Identities = 31/129 (24%), Positives = 31/129 (24%), Gaps = 3/129 (2%)
Frame = +2
Query: 548 PXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPX 727
P G GP G P P P P P P PP PP
Sbjct: 252 PSGGPPGPFNPSG----APPSGGPPGPFDPSGAPPSGGPPGPFD----PSGAPPSGGPPG 303
Query: 728 A--PXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPP-XXXXXPXXXXPXPPXXXXXX 898
P G P P P G P P PP P PP
Sbjct: 304 PFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG 363
Query: 899 XXPPXXXPP 925
P PP
Sbjct: 364 PFDPSGAPP 372
Score = 28.7 bits (61), Expect = 6.5
Identities = 31/129 (24%), Positives = 31/129 (24%), Gaps = 3/129 (2%)
Frame = +2
Query: 548 PXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPX 727
P G GP G P P P P P P PP PP
Sbjct: 297 PSGGPPGPFDPSG----AQPSGGPPGPFNPSGAPPSGGPPGPFD----PSGAPPSGGPPG 348
Query: 728 A--PXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPP-XXXXXPXXXXPXPPXXXXXX 898
P G P P P G P P PP P PP
Sbjct: 349 PFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPG 408
Query: 899 XXPPXXXPP 925
P PP
Sbjct: 409 PFNPSGAPP 417
Score = 28.7 bits (61), Expect = 6.5
Identities = 31/129 (24%), Positives = 31/129 (24%), Gaps = 3/129 (2%)
Frame = +2
Query: 548 PXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPX 727
P G GP G P P P P P P PP PP
Sbjct: 387 PSGGPPGPFDPSG----APPSGGPPGPFNPSGAPPSGGPPGPFN----PSGAPPSGGPPG 438
Query: 728 A--PXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPP-XXXXXPXXXXPXPPXXXXXX 898
P G P P P G P P PP P PP
Sbjct: 439 PFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 498
Query: 899 XXPPXXXPP 925
P PP
Sbjct: 499 PFNPSGAPP 507
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/81 (25%), Positives = 21/81 (25%), Gaps = 3/81 (3%)
Frame = +2
Query: 692 PXRXPPXXXP--PXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPP-XXXXXPXX 862
P PP P P P G P P P G P P PP P
Sbjct: 202 PSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 261
Query: 863 XXPXPPXXXXXXXXPPXXXPP 925
PP P PP
Sbjct: 262 PSGAPPSGGPPGPFDPSGAPP 282
Score = 28.3 bits (60), Expect = 8.6
Identities = 33/134 (24%), Positives = 33/134 (24%), Gaps = 8/134 (5%)
Frame = +2
Query: 548 PXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPX 727
P G GP G P P P P P P PP PP
Sbjct: 207 PSGGPTGPFDPSG----APPSGGPPGPFNPSGAPPSGGPPGPFD----PSGAPPSGGPPG 258
Query: 728 A--PXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXP----PXXXXXPXXXXP--XPPX 883
P G P P P G P P P P P P PP
Sbjct: 259 PFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPG 318
Query: 884 XXXXXXXPPXXXPP 925
PP PP
Sbjct: 319 PFNPSGAPPSGGPP 332
Score = 28.3 bits (60), Expect = 8.6
Identities = 31/129 (24%), Positives = 31/129 (24%), Gaps = 3/129 (2%)
Frame = +2
Query: 548 PXGXXXGPXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPX 727
P G GP G P P P P P P PP PP
Sbjct: 342 PSGGPPGPFNPSG----APPSGGPPGPFDPSGAPPSGGPPGPFD----PSGAPPSGGPPG 393
Query: 728 A--PXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPRPXPP-XXXXXPXXXXPXPPXXXXXX 898
P G P P P G P P PP P PP
Sbjct: 394 PFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPG 453
Query: 899 XXPPXXXPP 925
P PP
Sbjct: 454 PFNPSGAPP 462
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/80 (26%), Positives = 21/80 (26%), Gaps = 3/80 (3%)
Frame = +2
Query: 704 PPXXXPPXAPXGXXPXPXXPXXXXXXXXPXXGXXPRXXXPR---PXPPXXXXXPXXXXPX 874
P PP P G P P P G P P PP P P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP--PPPP 118
Query: 875 PPXXXXXXXXPPXXXPPPXP 934
PP PP P P
Sbjct: 119 PPSGLGVAPQPPRPKTPVNP 138
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +2
Query: 569 PXPXXGRVXXVXPXAPXPXPXXXXXXXPXXXXXPPXXXXXXPXRXPPXXXPPXAPXGXXP 748
P P + P P P P P PP P R PP P P G P
Sbjct: 25 PPPDWFFPGPLRPWGPPP-PWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRP--PWGLPP 81
Query: 749 XPXXP 763
P P
Sbjct: 82 PPPPP 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,453,301
Number of Sequences: 27780
Number of extensions: 110843
Number of successful extensions: 868
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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