Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_N16
(912 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 47 2e-05
04_03_0828 - 20118303-20119086,20119197-20119240 46 6e-05
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850... 44 2e-04
07_03_1588 + 27942415-27942434,27942561-27942629,27942743-27943550 44 2e-04
02_03_0386 + 18404641-18404673,18406366-18406558,18406688-184067... 42 5e-04
07_03_1590 + 27960241-27961104 40 0.002
03_06_0569 + 34789286-34790052,34791216-34791512,34791604-347918... 40 0.002
03_02_0695 + 10472174-10472286,10472390-10473239 40 0.002
07_03_1598 + 28019788-28019834,28020404-28021289 40 0.003
07_03_1597 + 28016737-28016771,28016881-28017742 40 0.004
12_01_0922 - 9123287-9124088,9124184-9124273,9124354-9124383,912... 38 0.015
04_01_0407 - 5350916-5351699,5351930-5351970 37 0.019
07_03_1594 + 28004256-28004287,28004399-28005290 37 0.026
07_03_1768 - 29363893-29364010,29364568-29365541 36 0.034
04_01_0406 - 5345149-5345935,5346302-5346339 36 0.045
07_03_1114 + 24072771-24072858,24072960-24073176,24075101-24075974 35 0.078
04_03_0745 + 19244089-19244521,19244638-19244723,19245090-192452... 35 0.10
07_03_1592 + 27997033-27997190,27998291-27998365,27998778-27999570 34 0.18
07_03_1595 + 28007003-28007031,28007978-28008560,28009088-28009399 33 0.42
10_07_0045 + 12328388-12328419,12328504-12328645,12328862-123290... 31 0.96
07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383 30 2.9
02_04_0556 - 23848751-23849158,23850615-23850797,23853644-238539... 29 5.1
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 29 6.8
04_01_0052 - 548383-548494,548523-548592,549184-549364 28 9.0
03_05_0267 - 22538631-22539452 28 9.0
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 47.2 bits (107), Expect = 2e-05
Identities = 54/189 (28%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Frame = +2
Query: 251 VAFLDVADREGAALEAQLIIKF-GALRVK---FIKCDVGDERQLASAYKQVLDKYKRLDG 418
V F + RE A+L KF G L+V FIKCDV + L++A+ + +D Y LD
Sbjct: 36 VDFSEENGREAASLVQNENKKFHGDLKVPSAMFIKCDVTNAGDLSAAFGKHVDTYGGLDI 95
Query: 419 VINSAAV----LSVDDNS-----FNRMIDINFTGTVNSTLKALDIM-GADKXXXXXXXXX 568
IN A + L DD S + +++N ++ T A IM K
Sbjct: 96 CINCAGIAIKTLVYDDRSDGTSTWRHAVNVNLVAVIDGTRIASQIMRSGKKPGVIINIGS 155
Query: 569 XXXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSVCLGPTDTAIXLXEX 748
L +N P+Y+ TKA V+ F+ + R +RV +C P + E
Sbjct: 156 AAGLYPMNFD---PIYSGTKAGVVMFTRSLA---PLKRHGIRVNVLC--PEFVQTNMAEQ 207
Query: 749 LNXXLIXST 775
L+ +I T
Sbjct: 208 LSRRIIDVT 216
>04_03_0828 - 20118303-20119086,20119197-20119240
Length = 275
Score = 45.6 bits (103), Expect = 6e-05
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Frame = +2
Query: 236 ENARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLD 415
++ V D+ D GA L A+L G+ +++CDV E +A+A + +Y +LD
Sbjct: 40 KHGAQVVVADIQDEAGARLCAEL----GSATASYVRCDVTSEDDVAAAVDHAVARYGKLD 95
Query: 416 GVINSA--------AVLSVDDNSFNRMIDINFTGTVNSTLKALDIMGA 535
+ N+A ++L F+R++ +N TG T A +M A
Sbjct: 96 VMFNNAGIGGAACHSILESTKADFDRVLAVNLTGPFLGTKHAARVMVA 143
>07_03_1591 +
27967065-27967090,27967236-27968054,27984940-27985022,
27985590-27985744,27985956-27986461,27986551-27986703,
27987146-27987485,27987558-27987822,27987897-27988634,
27989734-27989779,27989849-27990223,27991511-27991567,
27991640-27992438
Length = 1453
Score = 44.0 bits (99), Expect = 2e-04
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 9/179 (5%)
Frame = +2
Query: 236 ENARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLD 415
+N V D+ D G ++ A+L + +CDV DE Q+A+A + ++ RLD
Sbjct: 64 KNGAKVIIADIQDDLGHSVAAEL-----GPDAAYTRCDVADEAQVAAAVGLAVKRHGRLD 118
Query: 416 GVINSAAV---------LSVDDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXX 568
N+A + +VD F+R++ +N T+ + A M
Sbjct: 119 VFHNNAGIAGALPQDDMAAVDLGDFDRVMAVNARSTLAAVKHAARAMAPRCSGCVLCTSS 178
Query: 569 XXXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSVCLGPTDTAIXLXE 745
++ + +PVY+ +KA V+ +I E R +RV ++ G T T + L +
Sbjct: 179 GAGVIPV---PAVPVYSVSKATVI--AIVRAAAEPMARHGLRVNAISPGATRTPLLLRQ 232
>07_03_1588 + 27942415-27942434,27942561-27942629,27942743-27943550
Length = 298
Score = 43.6 bits (98), Expect = 2e-04
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Frame = +2
Query: 239 NARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDG 418
N V DV D G A+ A+L GA + +CDV DE Q+A+A + ++ RLD
Sbjct: 56 NGAKVILADVQDDLGHAVAAEL----GADAASYARCDVTDEAQVAAAVDLAVARHGRLDV 111
Query: 419 VINSAA---------VLSVDDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXX 571
V N+A V ++D F+R++ +N V A +M +
Sbjct: 112 VFNNAGIPGDLTPTPVGALDLADFDRVMAVNTRAVVAGVKHAARVMVPRRRGSIICTAST 171
Query: 572 XXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSV 706
++ +P Y+ +KAAVL + + R+ VRV ++
Sbjct: 172 AGVIG---GVAVPHYSVSKAAVL--GLVRAVAGEMARSGVRVNAI 211
>02_03_0386 +
18404641-18404673,18406366-18406558,18406688-18406773,
18407693-18407824,18407923-18408087,18409440-18409865
Length = 344
Score = 42.3 bits (95), Expect = 5e-04
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Frame = +2
Query: 233 FENARHVAFLDVADREGAALE--AQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYK 406
++ A A L + R ALE A ++ G+ V + DV D Q A ++ + +
Sbjct: 15 YQYAAQGACLALVARRKKALEGVAAAALERGSPDVLVLPADVSDADQSRRAVEETVAHFG 74
Query: 407 RLDGVINSAAV---LSVDD----NSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXX 565
+L+ ++ +A + S D+ +F +M+D+NF G+V T AL + A K
Sbjct: 75 KLNHLVANAGIWSSCSFDEVTNITAFTKMMDVNFWGSVYPTYYALPHLKASKGKLVVSCS 134
Query: 566 XXXXLLALNLTSHLPVYAATKAAVLQF 646
+ TS + Y ATKAA L+F
Sbjct: 135 AAGTV----GTSRMSFYNATKAAQLRF 157
>07_03_1590 + 27960241-27961104
Length = 287
Score = 40.3 bits (90), Expect = 0.002
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 9/174 (5%)
Frame = +2
Query: 239 NARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDG 418
N V DV D G A A+L + +CDV DE Q+A+A + ++ RLD
Sbjct: 49 NGAKVIITDVNDDLGHAAAAEL-----GPDATYARCDVADEAQVAAAVDLAVARHGRLDV 103
Query: 419 VINSAAV---------LSVDDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXX 571
+ N+AA+ SVD F+ M+ +N ++ A +M +
Sbjct: 104 MHNNAAIPGRFPQDDMASVDLADFDAMMAVNARASLAGIKHAARVMAPRRAGVILCTASA 163
Query: 572 XXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSVCLGPTDTAI 733
+L L + ++ TKA ++ +I E R +RV ++ G T +
Sbjct: 164 VGVLPLPAVA---THSITKATII--AIVRAAAEPLARHGLRVNAISPGAVRTPV 212
>03_06_0569 +
34789286-34790052,34791216-34791512,34791604-34791835,
34792334-34792391,34792800-34792931,34793108-34793246,
34793460-34793622,34793693-34793734
Length = 609
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Frame = +2
Query: 251 VAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDGVINS 430
V DV D G A+ A + G R +++CDV DE Q+ +A + ++ RLD ++++
Sbjct: 30 VVIADVQDELGEAVAAS--VAGGGCR--YVRCDVTDEAQVEAAVAAAVAEHGRLDVMVSN 85
Query: 431 AAVL-------SVDDNSFNRMIDINFTG 493
A VL +D + +R++ +NF G
Sbjct: 86 AGVLLPTGPVVDMDLAALDRVMSVNFRG 113
>03_02_0695 + 10472174-10472286,10472390-10473239
Length = 320
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +2
Query: 245 RHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDGVI 424
+H A + +AD + AA EA L G V F++CDV E + A ++ + +Y RLD +
Sbjct: 63 KHGAKVVIADIDDAAGEA-LAAALGP-HVGFVRCDVSVEEDVERAVERAVARYGRLDVLC 120
Query: 425 NSA-----------AVLSVDDNSFNRMIDINFTG 493
N+A ++LS D F+R++ +N G
Sbjct: 121 NNAGVLGRQTRAAKSILSFDAGEFDRVLRVNALG 154
>07_03_1598 + 28019788-28019834,28020404-28021289
Length = 310
Score = 39.9 bits (89), Expect = 0.003
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 9/165 (5%)
Frame = +2
Query: 239 NARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDG 418
N V D+ D G A+ A+L GA + CDV E+ +A+A + ++ RLD
Sbjct: 68 NGAKVIIADIQDDLGRAVAAEL----GADAASYTHCDVTVEKDVAAAVDLAVARHGRLDV 123
Query: 419 VINSAAVL---------SVDDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXX 571
V ++A V+ ++D + ++R++ +N + A +M +
Sbjct: 124 VYSNAGVIGAPAPASLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASS 183
Query: 572 XXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSV 706
+L + S PVY+ +KAA++ + Q R VRV ++
Sbjct: 184 AAVLG-GVAS--PVYSMSKAAIV--GMVRAVARQLARDGVRVNAI 223
>07_03_1597 + 28016737-28016771,28016881-28017742
Length = 298
Score = 39.5 bits (88), Expect = 0.004
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 9/176 (5%)
Frame = +2
Query: 239 NARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDG 418
N V D+ D G A+ +L GA + CDV E+ +ASA + ++ RLD
Sbjct: 56 NGAKVIIADIKDDLGRAVAGEL----GADAASYTHCDVTVEKDVASAVDLAVARHGRLDV 111
Query: 419 VINSAAV---------LSVDDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXX 571
V ++AA+ ++D + ++R++ +N + A +M +
Sbjct: 112 VYSNAAIAGGAPPATLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTAST 171
Query: 572 XXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSVCLGPTDTAIXL 739
+L P Y+ +KAAV+ + Q +V +S PT AI L
Sbjct: 172 AAVLG---GMAAPAYSMSKAAVVGMVRTVARQLARDGVRVNAISPHAVPTPMAIGL 224
>12_01_0922 -
9123287-9124088,9124184-9124273,9124354-9124383,
9125379-9125590
Length = 377
Score = 37.5 bits (83), Expect = 0.015
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Frame = +2
Query: 335 FIKCDVGDERQLASAYKQVLDKYKRLDGVINSAAV---------LSVDDNSFNRMIDINF 487
+ +CDV DE Q+A+A + + RLD ++A + LSVD F+R++ +N
Sbjct: 164 YTRCDVADEAQVAAAVDLAVRLHGRLDVFHSNAGIPGRIPQDDALSVDLAGFDRVMAVNA 223
Query: 488 TGTVNSTLKALDIMGADKXXXXXXXXXXXXLLALNLTSHLPVYAATKAAVLQFSIXMGTQ 667
+ + A +M + ++ + L +Y+ +KA V+ ++
Sbjct: 224 RPALAAIKHAARVMAPRRTGCVICTASGAGVVPM---PALAMYSVSKATVI--AVVRAMA 278
Query: 668 EQFTRTKVRVLSVCLGPTDTAIXLXE 745
E R +RV ++ G T T + L E
Sbjct: 279 EPLARHGLRVNAISPGATRTPMMLNE 304
>04_01_0407 - 5350916-5351699,5351930-5351970
Length = 274
Score = 37.1 bits (82), Expect = 0.019
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Frame = +2
Query: 236 ENARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLD 415
++ V D+ D GA+L A+L G ++ CDV +E +A+A + ++ +LD
Sbjct: 39 KHGARVVVADIQDELGASLVAEL----GPDASSYVHCDVTNEGDVAAAVDHAVARFGKLD 94
Query: 416 GVINSAAV--------LSVDDNSFNRMIDINFTGTVNSTLKALDIM 529
+ N+A V F R++ +N G T A +M
Sbjct: 95 VMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVM 140
>07_03_1594 + 28004256-28004287,28004399-28005290
Length = 307
Score = 36.7 bits (81), Expect = 0.026
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Frame = +2
Query: 239 NARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDG 418
N V D+ D G A+ A+L GA + CDV E +A+A + ++ RLD
Sbjct: 65 NGAKVILADIQDDLGRAMAAEL----GADAASYTHCDVTVEADVAAAVDLAVARHGRLDV 120
Query: 419 VINSAAVL---------SVDDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXX 571
V ++A + ++D + ++R++ +N V A +M +
Sbjct: 121 VYSNAGIAGAAAPPTLSALDLDDYDRVMAVNARSMVACLKHAARVMSPRRAGCILCTASS 180
Query: 572 XXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSV 706
L+ +L + P Y +KAAV+ + Q R VRV ++
Sbjct: 181 TALIG-DLAA--PAYCISKAAVV--GMVRTVARQLARDGVRVNAI 220
>07_03_1768 - 29363893-29364010,29364568-29365541
Length = 363
Score = 36.3 bits (80), Expect = 0.034
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2
Query: 251 VAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDGVINS 430
V D+ D G AL A L G ++ CDV +E + A L+++ RLD + N+
Sbjct: 100 VVVADIDDAGGHALAAAL----GPHACTYVHCDVAEEADVERAVATTLEQHGRLDVLCNN 155
Query: 431 AAVL 442
A VL
Sbjct: 156 AGVL 159
>04_01_0406 - 5345149-5345935,5346302-5346339
Length = 274
Score = 35.9 bits (79), Expect = 0.045
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Frame = +2
Query: 236 ENARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLD 415
++ V D+ D GA+L A+L G ++ CDV +E +A+A + + +LD
Sbjct: 38 KHGARVVVADIQDELGASLVAEL----GPDASSYVHCDVTNEGDVAAAVDHAVATFGKLD 93
Query: 416 GVINSAAV-----LSVDDNS---FNRMIDINFTGTVNSTLKALDIM 529
+ N+A V + +++ F R++ +N G T A +M
Sbjct: 94 VMFNNAGVTGPPCFRITESTKEDFERVLAVNLIGPFLGTKHAARVM 139
>07_03_1114 + 24072771-24072858,24072960-24073176,24075101-24075974
Length = 392
Score = 35.1 bits (77), Expect = 0.078
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 9/165 (5%)
Frame = +2
Query: 239 NARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLD- 415
N V D+ D G A+ A+L + +CDV DE Q+A+A + ++ RLD
Sbjct: 153 NGAKVILADIQDDLGRAVAAEL-----GPDAAYTRCDVTDEAQIAAAVDLAVARHGRLDI 207
Query: 416 -----GVINSAA---VLSVDDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXX 571
G+ S+A + S+D F+R++ N V + A +M +
Sbjct: 208 LYSNAGISGSSAPAPLASLDLADFDRVMAANARSAVAAVKHAARVMVPRRGGCVLCTGST 267
Query: 572 XXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSV 706
+L L + LP Y+ +KAAV+ + + R+ VRV ++
Sbjct: 268 TGMLG-GLAA-LP-YSLSKAAVV--GVVRLAAAELARSGVRVNAI 307
>04_03_0745 +
19244089-19244521,19244638-19244723,19245090-19245221,
19245335-19245499,19245602-19245892
Length = 368
Score = 34.7 bits (76), Expect = 0.10
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Frame = +2
Query: 266 VADREGAALEAQLIIK-FGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDGVINSAAVL 442
VA RE + E + G+ V + DV + ++ + RLD ++N+A +
Sbjct: 96 VARREASLGEVAARARALGSPDVLAVPGDVARPDDCRRFVQATVEHFGRLDHLVNNAGLA 155
Query: 443 SV-------DDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXXXXLLALNLTS 601
+V D +F +++D+NF GTV+ T AL + A + +LA+
Sbjct: 156 NVCWFEEVPDVANFKQVLDVNFWGTVHPTHAALPHLKASR-GKIFVNSSASAVLAM---P 211
Query: 602 HLPVYAATKAAVLQFS 649
+ Y A+KAAV F+
Sbjct: 212 RMSFYNASKAAVHNFA 227
>07_03_1592 + 27997033-27997190,27998291-27998365,27998778-27999570
Length = 341
Score = 33.9 bits (74), Expect = 0.18
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Frame = +2
Query: 239 NARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDG 418
N V DV D G A+ A+L + +CDV DE Q+A+A + + RLD
Sbjct: 104 NGAKVIIADVQDDLGHAVAAEL-----GPDAAYTRCDVTDEAQIAAAVDLAVACHGRLDV 158
Query: 419 VINSAAV--------LSVDDNSFNRMIDINFTGTVNSTLKALDIM 529
+ N+A V S+D F+R++ +N + A +M
Sbjct: 159 LHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVM 203
>07_03_1595 + 28007003-28007031,28007978-28008560,28009088-28009399
Length = 307
Score = 32.7 bits (71), Expect = 0.42
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 9/176 (5%)
Frame = +2
Query: 239 NARHVAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDG 418
N V D+ D G A+ +L GA + CDV E +A+A + ++ RLD
Sbjct: 64 NGAKVILADIQDDLGRAVAGEL----GADAASYTHCDVTVEADVAAAVDLAVARHGRLDV 119
Query: 419 VINSAAV---------LSVDDNSFNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXX 571
V ++A + ++D + ++R++ +N V A +M +
Sbjct: 120 VYSNAGIAGGAPPATLAALDLDDYDRVMAVNARSMVACLKHAARVMAPRRAGCILCTASS 179
Query: 572 XXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSVCLGPTDTAIXL 739
+L N+ Y+ +KAAV+ + Q R VRV ++ TA+ L
Sbjct: 180 TAVLG-NIGP--LAYSMSKAAVVGM-VQTTVARQLARDGVRVNTISPHAIPTAMAL 231
>10_07_0045 +
12328388-12328419,12328504-12328645,12328862-12329054,
12329224-12329320,12329404-12329528,12329616-12329734,
12331225-12331298,12331359-12331413,12331450-12331500,
12331611-12331857,12331940-12332036,12332170-12332244,
12334286-12334488,12334757-12334905,12334995-12335168,
12335276-12335401,12335493-12335623,12335743-12335818,
12335898-12336027,12336115-12336193,12336267-12336465,
12336591-12336698,12336769-12337025,12337267-12337282
Length = 984
Score = 31.5 bits (68), Expect = 0.96
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 311 KFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDGVINSAAVLSVDDNSF 463
KFGA ++FI D D R A AY Q D R +G I S V + + F
Sbjct: 282 KFGAQYIRFILKDTTDTRMEALAYDQQAD---RFNGTIQSGLVYNFTNVGF 329
>07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383
Length = 542
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 245 RHVAFLDVADREGAALEAQLIIKFGALR-VKFIKCDVGDERQLASAYKQVLDKYKRLDGV 421
+HVA VA+RE + ++++ F R + + +G E +A ++++ K ++LD V
Sbjct: 245 QHVATFAVAEREDRGIYRRIVVSFSWRRQMPRLALTLGLEEDMADIIEELIAKGQQLDAV 304
>02_04_0556 -
23848751-23849158,23850615-23850797,23853644-23853908,
23854019-23854059
Length = 298
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 275 REGAALEAQLI-IKFGALR-VKFIKCDVGDERQLASAYKQVLDKYKRLDGVINSAAVL-- 442
R+GA EA ++ LR V+F + DV D +A+ + D+ LD ++N+AAV
Sbjct: 52 RDGARGEAAAAALRARGLRSVRFRRLDVSDPASVAAFASWLRDELGGLDILVNNAAVSFN 111
Query: 443 SVDDNS 460
+D NS
Sbjct: 112 EIDTNS 117
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -3
Query: 691 YFSPGKLFLRAHXNAEL*YRCFSSGVNR*MAGEIKSK*GRYIHYNTARTAFICPH 527
+ G L AH + E Y C +G ++ K K R+ +T F+CPH
Sbjct: 54 FVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLK--RHFLIHTGEKNFVCPH 106
>04_01_0052 - 548383-548494,548523-548592,549184-549364
Length = 120
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 344 CDVGDERQLASAYKQVLDKYKRLDGVINSAAVLSVDD 454
C +G L S Q D Y +D V++ A V+ V+D
Sbjct: 42 CSIGQFPALDSFAAQEFDSYDVIDAVVSGAVVVVVED 78
>03_05_0267 - 22538631-22539452
Length = 273
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 181 GDRWCGRRRRWLGQGVA 231
G RW GRRRRW + A
Sbjct: 95 GGRWLGRRRRWWARATA 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,965,741
Number of Sequences: 37544
Number of extensions: 341037
Number of successful extensions: 876
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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