Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_N16
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49829-4|AAK68350.1|  427|Caenorhabditis elegans Dehydrogenases,...    42   5e-04
Z68341-1|CAA92764.1|  258|Caenorhabditis elegans Hypothetical pr...    37   0.017
AC024791-27|AAM43788.1|  254|Caenorhabditis elegans Hypothetical...    28   8.1  

>U49829-4|AAK68350.1|  427|Caenorhabditis elegans Dehydrogenases,
           short chain protein29 protein.
          Length = 427

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
 Frame = +2

Query: 251 VAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDGVINS 430
           VA +DV ++EG     + I   G +  KF  CD+ D   +    K++ D +  ++ VI +
Sbjct: 68  VAIIDV-NKEGGLETVKTIAAEGNM-AKFWYCDISDVDNMKKTAKEIEDTFGDVNIVICN 125

Query: 431 AAVLS------VDDNSFNRMIDINFTGTVNSTLKA 517
           AA+LS      + D    + +D+N  GT+N T++A
Sbjct: 126 AAILSFTSFMEISDELLRKCLDVNIFGTIN-TIRA 159


>Z68341-1|CAA92764.1|  258|Caenorhabditis elegans Hypothetical
           protein F01G4.2 protein.
          Length = 258

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 15/176 (8%)
 Frame = +2

Query: 251 VAFLDVADREGAALEAQLIIKFGALRVKFIKCDVGDERQLASAYKQVLDKYKRLDGVINS 430
           VA LD+   +GA +  ++    G +   F    V  E ++ +A+ +V  +Y RLD ++N 
Sbjct: 36  VAILDLPQSKGADVAKEI----GGI---FTPASVTSEEEVRAAFAKVQAEYGRLDALVNC 88

Query: 431 AAVL------------SVDDNSFNRMIDINFTGTVNSTLKALDIMG---ADKXXXXXXXX 565
           A +              VD     + ID+N  GT N     + +MG    D         
Sbjct: 89  AGIAYAFKLYSVQKKKHVDFEKIRQTIDVNVLGTFNVIRHGVALMGEHEKDANGQRGVVI 148

Query: 566 XXXXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSVCLGPTDTAI 733
               + A +  +    Y+A+K A++  ++ +     F    +R  ++  G  DT +
Sbjct: 149 NTASVAAFDGQTGQSAYSASKGAIVGMTLPLA--RDFAGDGIRFNTIAPGLMDTPL 202


>AC024791-27|AAM43788.1|  254|Caenorhabditis elegans Hypothetical
           protein Y47G6A.22 protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
 Frame = +2

Query: 242 ARHVAFLDVADREGAALE--AQLIIKFGALR--VKFIKCDVGDERQLASAYKQVLDKYKR 409
           AR+   L +  R  AAL   A  I+  G+ +  V     ++  E    +     + K+ R
Sbjct: 22  ARNNYKLSLTGRNVAALNELAGQIVSAGSDKNDVLVTAVELASEEAPKTIVDATVQKFGR 81

Query: 410 LDGVINSAAVL---SVDDNS---FNRMIDINFTGTVNSTLKALDIMGADKXXXXXXXXXX 571
           +D +INSA +L    V D+    ++ ++++N    +  T  AL  +   K          
Sbjct: 82  IDTLINSAGILRAGPVLDSGIEVYDELMNVNVRSLIRLTRAALPHIITTKGTVVNVSSIN 141

Query: 572 XXLLALNLTSHLPVYAATKAAVLQFSIXMGTQEQFTRTKVRVLSVCLGPTDT 727
                 N+T     Y  +K+AV QF+  +    +     VRV +VC G T T
Sbjct: 142 GPCPFPNVT----YYCMSKSAVDQFTKCLAL--EMAPNGVRVNAVCPGVTVT 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,055,536
Number of Sequences: 27780
Number of extensions: 288856
Number of successful extensions: 660
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)