Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_N13
         (869 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    34   0.15 
U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical pr...    32   0.61 
Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AF016450-10|AAB65990.1|  166|Caenorhabditis elegans Hypothetical...    28   7.5  

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 150 PFPTRXCP-QGAXSVLXCPQMAEPXCAHPEVHAFVDHVGPCAVPXCFCXRPNVRNTKTGK 326
           P P R    +G   +  C    EP C +       D V  C    C C +  VR++ TGK
Sbjct: 69  PIPIRKPECEGDEELKACGSACEPTCDNENPEC--DLV--CMTNVCQCKKGLVRDSATGK 124

Query: 327 CVPESEC 347
           CV +++C
Sbjct: 125 CVEKNKC 131


>U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical
           protein C53B7.2 protein.
          Length = 195

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +3

Query: 198 CPQMAEPXCAHPEVHAFVDHVGPCAVPXCFCXRPNVRNTKTGKCVPESEC 347
           C QM  P C  P     VD    C  P C C  P    + + +C+P + C
Sbjct: 38  CTQMCPPTCESPNPQCRVD----CTRPSCTCL-PGHVYSNSRQCIPANSC 82


>Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical
           protein K07A1.6 protein.
          Length = 100

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
 Frame = +3

Query: 198 CPQMAEPXCAHPEVHAFVDHVGPCAVPXCFCXRPNVR-NTKTGKCVPESEC 347
           C    E  C HP    F     PC    C C     R N  TG+CV    C
Sbjct: 47  CGNGCEKSCTHPRQPPFSQCKLPCIPYSCRCNPGFYRDNQGTGRCVRLRRC 97


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/66 (28%), Positives = 24/66 (36%)
 Frame = +3

Query: 168 CPQGAXSVLXCPQMAEPXCAHPEVHAFVDHVGPCAVPXCFCXRPNVRNTKTGKCVPESEC 347
           C  G      C  M  P     ++   +    P   P C C   NVRN  TG  +P    
Sbjct: 30  CTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPPKCVCTEGNVRNIITGPSLPALFK 86

Query: 348 **NCVN 365
             NCV+
Sbjct: 87  PYNCVS 92


>AF016450-10|AAB65990.1|  166|Caenorhabditis elegans Hypothetical
           protein B0238.12 protein.
          Length = 166

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +3

Query: 198 CPQMAEPXCAHPEVHAFVDHVGPCAVPXCFCXRPNVRNTKTGKCVPESEC 347
           C    EP C +P           C    C C    VRN  T +CV +++C
Sbjct: 47  CGTACEPSCTNPNPMC----TKQCINNVCQCRSGYVRNEITRQCVRQAQC 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,107,632
Number of Sequences: 27780
Number of extensions: 168156
Number of successful extensions: 269
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)