Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_N10
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0619 + 26652923-26653267,26653440-26654273 50 2e-06
11_02_0012 - 7346282-7347136,7347234-7347593 50 3e-06
11_02_0011 - 7337618-7338496,7338596-7338991 49 6e-06
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 45 7e-05
11_02_0014 - 7352619-7352918,7353173-7353418 44 1e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 43 4e-04
11_01_0771 + 6453130-6454488 40 0.003
01_06_0824 - 32243495-32244319,32244449-32244859 38 0.014
11_01_0767 + 6438648-6438809,6439146-6440000 35 0.099
01_01_1152 + 9170628-9171899 35 0.099
11_01_0750 - 6315126-6315896,6316371-6316784 32 0.53
04_03_0997 - 21548158-21548377,21548482-21548523,21548646-215487... 32 0.53
10_08_0965 + 21915842-21916906 29 3.7
09_04_0198 + 15528576-15528645,15528746-15528893,15529182-155293... 29 3.7
11_08_0098 - 28334865-28336114,28336228-28336357 29 6.5
07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672 29 6.5
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 29 6.5
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Frame = +1
Query: 223 SHFVMSGLSAWTLISALSFGATDETLQEIYQ-VARLHPHKCFNNKIFKLLRDQKETAVGT 399
S+F+ S L ++ L+ G ETL+++ + H H+ N LL + + A
Sbjct: 20 SNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQ-LNAASAGLLAEMR--AWPQ 76
Query: 400 LEKSSALFVDERMIVQEKFQVDVQKTGVCGVKVLSFDDTISSAAT-INQYVNEVTHSTIE 576
L ++ +FVD + ++ +FQ + + F + ++AA +N+++++ T+ +
Sbjct: 77 LSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLN 136
Query: 577 EIVIPSDL-EGVILVLIDALYFKGAWKTQXPYDDTEPSAFYNHQGNQI 717
+ P VL +A++FK W + DT+ F+ G ++
Sbjct: 137 NTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRV 184
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 49.6 bits (113), Expect = 3e-06
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 9/191 (4%)
Frame = +1
Query: 172 LYEFSNDLAVRINYETDS---HFVMSGLSAWTLISALSFGATDETLQEIYQV---ARLHP 333
L F+ LA R+ + D+ + V S +S + ++ ++ GA TL E+ + A L
Sbjct: 11 LTAFALRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDD 70
Query: 334 -HKCFNNKIFKLLRDQKETAVGTLEKSSALFVDERMIVQEKFQV-DVQKTGVCGVKVLSF 507
+ + L D+ E+ + + ++ DER+ ++ ++ D Q+
Sbjct: 71 LEESVRRAVEVGLADESESGGPRVSYACGVWHDERLALKPAYRAADFQR----------- 119
Query: 508 DDTISSAATINQYVNEVTHSTIEEIVIPSDLEG-VILVLIDALYFKGAWKTQXPYDDTEP 684
SS IN++V++ T+ I EI+ + G LVL++A+YFKG W P + T
Sbjct: 120 -QPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTT 178
Query: 685 SAFYNHQGNQI 717
F+ G+ +
Sbjct: 179 GKFHRLDGSSV 189
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 48.8 bits (111), Expect = 6e-06
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Frame = +1
Query: 205 INYETDSHFVMSGLSAWTLISALSFGATDETLQEIYQV---ARLHP-HKCFNNKIFKLLR 372
+ ++ + V S S + ++ ++ GA TL E+ + A L + + L
Sbjct: 25 VGVSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLA 84
Query: 373 DQKETAVGTLEKSSALFVDERMIVQEKFQVDVQKTGVCGVKVLSFD-DTISSAATINQYV 549
D+ + + + ++ DE + ++ ++ T + +F S IN++V
Sbjct: 85 DESASGGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 550 NEVTHSTIEEIVIPSDLE-GVILVLIDALYFKGAWKTQXPYDDTEPSAFYNHQGNQIGDV 726
++ T+ I EI+ + LVL++A+YFKG W P T F+ G+ + DV
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSV-DV 203
Query: 727 XLM 735
M
Sbjct: 204 PFM 206
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 45.2 bits (102), Expect = 7e-05
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 535 INQYVNEVTHSTIEEIVIPSDLE-GVILVLIDALYFKGAWKTQXPYDDTEPSAFYNHQGN 711
+N +V+ VT I+ I P + LVL +ALYFKGAW + TE F+ G
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 712 QIGDVXLMFVXGSFNLSRIDQLK 780
+ M LS D LK
Sbjct: 529 SV-QAPFMSTRKKQYLSSYDSLK 550
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 526 AATINQYVNEVTHSTIEEIVIPSDLEGVI-LVLIDALYFKGAWKTQXPYDDTEPSAFYNH 702
A+ +N +V +VT I+EI+ P ++ LVL +ALYFKGAW + T+ F+
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLL 273
Query: 703 QGNQI 717
G +
Sbjct: 274 DGKSV 278
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 523 SAATINQYVNEVTHSTIEEIVIPSDLEGVI-LVLIDALYFKGAWKTQXPYDDTEPSAFYN 699
S IN++V++ T+ I EI+ + + LVL++A+YFKG W P + T F+
Sbjct: 86 SRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHR 145
Query: 700 HQGNQI 717
G+ +
Sbjct: 146 LDGSSV 151
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 526 AATINQYVNEVTHSTIEEIVIPSDLEGVI-LVLIDALYFKGAWKTQXPYDDTEPSAFYNH 702
A+ +N +V+ VT I+EI+ P ++ LVL +ALYFKGAW + T+ F
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 703 QGNQI 717
G +
Sbjct: 66 DGKSV 70
>11_01_0771 + 6453130-6454488
Length = 452
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 535 INQYVNEVTHSTIEEIVIPSDL-EGVILVLIDALYFKGAWKTQXPYDDTEPSAFYNHQG 708
IN + T I +++ P + +VL +A+YFKG W DTE FY H G
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFYRHDG 235
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 37.5 bits (83), Expect = 0.014
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 13/179 (7%)
Frame = +1
Query: 220 DSHFVMSGLSAWTLISALSFGATDETLQEIYQVARLHP-----HKCFNNKIFKL-LRDQK 381
D + +S LS ++ L GA ETL +I +A L P H + + L D
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQI--IAFLGPAGGPAHAALASHVALCSLADDS 88
Query: 382 ----ETAVGTLEKSSALFVDERMIVQEKFQVDVQKTGVCGVKVLSFDDTISSAAT-INQY 546
+ + ++ ++VD + ++ + V + +SF D + A IN++
Sbjct: 89 GPGDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEW 148
Query: 547 VNEVTHSTIEEIVIPSDL--EGVILVLIDALYFKGAWKTQXPYDDTEPSAFYNHQGNQI 717
T I++ +P D VL +ALYFKG W+++ T FY G +
Sbjct: 149 FESATAGRIKDF-LPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHV 206
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 34.7 bits (76), Expect = 0.099
Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = +1
Query: 361 KLLRDQKETAVGTLEKSSALFVDERMIVQEKFQVDVQKTGVCGVKVLSFDD-TISSAATI 537
++L DQ T + + ++D ++ ++ + T + F + + + I
Sbjct: 3 RVLADQAPTGGPCVSFACGSWLDASYSLKPAYRDAIVGTYKGAASTVDFKNHPVEARKEI 62
Query: 538 NQYVNEVTHSTIEEIVIP-SDLEGVILVLIDALYFKGAWKTQXPYDDTEPSAFYNHQGNQ 714
N +V T + I E++ P S V+ +A+YFKG W DT F G+
Sbjct: 63 NAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSS 122
Query: 715 IGDVXLMFVXGSFN 756
+ + GS++
Sbjct: 123 VEVPFMQRPSGSYH 136
>01_01_1152 + 9170628-9171899
Length = 423
Score = 34.7 bits (76), Expect = 0.099
Identities = 12/40 (30%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 535 INQYVNEVTHSTIEEIVIPSDLEG-VILVLIDALYFKGAW 651
+N +V++ T I +++ P+ ++ ++VL +A++FKG W
Sbjct: 163 VNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTW 202
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 32.3 bits (70), Expect = 0.53
Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 2/121 (1%)
Frame = +1
Query: 361 KLLRDQKETAVGTLEKSSALFVDERMIVQEKFQVDVQKTGVCGVKVLSFDDTISSAAT-I 537
++LRD+ + L + ++ D + +F K F + A I
Sbjct: 87 RVLRDRSTSGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146
Query: 538 NQYVNEVTHSTIEEIVIPSDLE-GVILVLIDALYFKGAWKTQXPYDDTEPSAFYNHQGNQ 714
N +V + T T+ ++ ++ LVL ALYF+G W + T FY G
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTS 206
Query: 715 I 717
+
Sbjct: 207 V 207
>04_03_0997 -
21548158-21548377,21548482-21548523,21548646-21548722,
21548798-21548914,21549149-21549252,21549330-21549399,
21549489-21549598,21549845-21549932,21550006-21550096,
21550176-21550268,21550362-21550687,21550922-21551290,
21551934-21552020
Length = 597
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 472 KTGVCGVKVLSFD--DTISSAATINQYVNEVTHSTIEEIVIPSD 597
KT C + +L+F+ +TI ATI Q ++E T + +++V+PS+
Sbjct: 196 KTKGCPISILAFEVANTILKGATIMQSLSEDTVTYFKQVVLPSE 239
>10_08_0965 + 21915842-21916906
Length = 354
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 224 ATSSCPVCRRGLLYPH--FPSVLQMKLCKKSTR 316
A SCP+CR + PH P +L+++L S+R
Sbjct: 163 ANPSCPLCRASIALPHPPLPDLLRVELGSVSSR 195
>09_04_0198 +
15528576-15528645,15528746-15528893,15529182-15529377,
15529512-15529604,15530403-15530462,15530563-15530637,
15531072-15531152,15531262-15531603,15531967-15531999
Length = 365
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 540 VDSGCRGDRIVKRQNFDPTNTSFLHVHLE 454
+D+GC D RQ+ DP+ + H+HLE
Sbjct: 290 IDNGCSNDE--DRQSVDPSTSVVYHLHLE 316
>11_08_0098 - 28334865-28336114,28336228-28336357
Length = 459
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 338 NASITKYSSFSGIRRKLPSGR--WRKAQLCSLTRG*SCKKNSRWTCR 472
N+S++ SSFSGI GR R+A L R S + +S +CR
Sbjct: 373 NSSVSARSSFSGIGSSFNGGRLGMRRADEVLLERNFSARYSSSSSCR 419
>07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672
Length = 641
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 146 PPARTSKGHCTNSPTT*RSGSIMKRTATSSCPVCRRGL 259
PPA+T CT+ I+K +++S CP+CRR L
Sbjct: 401 PPAKTVITSCTHIYCQTCIMKILK-SSSSRCPICRRSL 437
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 274 SFGATDETLQEIYQVARLHPHKCFNNKIFKLLRDQKETAVGTLEKSSALFVDE 432
S G ++ +Q++ Q A LH K K +R+ +T + ++EKS + D+
Sbjct: 549 SGGLSEAEIQKMVQEAELHSQKDQERKALIDIRNNADTTIYSVEKSLGEYRDK 601
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,083,805
Number of Sequences: 37544
Number of extensions: 490517
Number of successful extensions: 1231
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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