Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_N09
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z75543-5|CAA99872.2|  270|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    28   10.0 
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ...    28   10.0 

>Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical
           protein W05E10.1 protein.
          Length = 484

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -2

Query: 380 WFVVETLYYNLESLYT--PSVMFGTSDYSAVVSPGHAVT 270
           WFV++T+  N+ESL +     M+  + + A+V  G+  T
Sbjct: 260 WFVIQTIAVNIESLCSVFTIAMYNWTSHQAIVYGGYIET 298


>Z75543-5|CAA99872.2|  270|Caenorhabditis elegans Hypothetical
           protein K01D12.5 protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = -2

Query: 389 HSHWFVVETLYYNLESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQCQSLA 231
           +  +    T Y N++++  P  M+G++  S VVS G++ + G N+     ++A
Sbjct: 83  YPQYLPTHTGYSNIQTVGQPYQMYGSAPGSNVVSGGNSESYGYNQQAPVPTVA 135


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 339 LYPKRNVRDFRLLCRCIPRPCGDPRAQPSSTVSKP 235
           LY K    D  + C C+    G+P+   S+T  KP
Sbjct: 83  LYDKVQCYDVSIYCWCVDELSGEPKLGSSTTRGKP 117


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
           presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 350 LESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQC 243
           L+++   S+  G S   AV   GH  T GLN   QC
Sbjct: 610 LDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQC 645


>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
           protein F07B7.12 protein.
          Length = 1900

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 350 LESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQC 243
           L+++   S+  G S   AV   GH  T GLN   QC
Sbjct: 610 LDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQC 645


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,855,355
Number of Sequences: 27780
Number of extensions: 158112
Number of successful extensions: 262
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)