Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_N08
(913 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.014
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.018
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.074
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.17
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.23
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.23
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.69
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 1.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 3.5
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 3.7
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.9
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 4.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = +3
Query: 477 PPRGXGGXXXG-PPPPPPPXXT---XXPXAPXXGGXXPPPPXXGHXSPPHXGXTPP 632
PP G G PPPPPPP P P PPPP S P G PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP---RSAPSTGRQPP 377
Score = 33.1 bits (72), Expect = 0.056
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +2
Query: 398 PPPXXXLXFXXAXGGGGGXXPPXXXPPPPRGXRXXFXAPPPXPPXXXPPPP--XPXXGGX 571
PPP G G PPPPR PP PPPP G
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
Query: 572 XPPP 583
PPP
Sbjct: 375 QPPP 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 458 PPXXXPPPPRGXRXXFXAPPPXPPXXXPPPPXPXXGGXXPP 580
PP P P A PP PP PP P PP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +1
Query: 457 PPXKXPP--PPAGXAVXFXGPPPXPPXTXPXXPXPPXXGGXSPPXP 588
PP PP PP+ PP P P P P +PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +1
Query: 400 PPXXXXXFXPGXGGGGGXXPPXKXPPPPAGXAVXFXGPPPXPPXTXPXXPXPPXXGGXSP 579
PP P G PP PP A A P P P P PP +P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPL---PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Query: 580 PXP 588
P
Sbjct: 485 AAP 487
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 473 PPPPRGXRXXFXAPPPXPPXXXPPPPXPXXGGXXP 577
PP P G A PP PP PPP P P
Sbjct: 457 PPLPAG----MPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Frame = +3
Query: 477 PPRGXGGXXXGPP--PPPPPXXTXXPXAPXXGGXXPPPPXXGHXSPPHXGXTP 629
PP G P PP PP P P PP P PP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 472 PPPPAGXAVXFXGPPPXPPXTXPXXPXP-PXXGGXSPPXP 588
PP G + PPP PP + P P G +PP P
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +1
Query: 457 PPXKXPPPPAGXAVXFXGPPPXPPXTXPXXPXPPXXGGXS----PPXP 588
PP A A PPP PP + PP G S PP P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP 340
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +3
Query: 477 PPRGXGGXXXGPPPPPPPXXTXXPXAPXXGGXXPPP--PXXGHXSPP 611
PP G PP P PP + P AP PP P +PP
Sbjct: 404 PPLGNASRTSTPPVPTPP--SLPPSAPPSLPPSAPPSLPMGAPAAPP 448
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/51 (39%), Positives = 20/51 (39%)
Frame = -2
Query: 600 GGXXXXGGGXXPPXXGXGGGGXXXGGXGGGAXKXNRXPRGGGGXFXGGXXP 448
GG GGG G GG G GG GGG P G GG G P
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 33.9 bits (74), Expect = 0.032
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -2
Query: 600 GGXXXXGGGXXPPXXGXGGGGXXXGGXGGGAXKXNRXPRGGG-GXFXGG 457
GG GGG P G GG G G G G GGG G F GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 590 PGXGGXXP-PXXGGXGXXGXVWGGXGGGPXXXTAXPAGGGGXXXG 459
PG GG GG G GG GGGP P G GG G
Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.018
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = +3
Query: 474 PPPRGXGGXXXGPPPPPPPXXTXXPXAPXXGGXXPPPPXXG--HXSPPHXGXTPP 632
PPP P P P P P AP GG PPPP G PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP---PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.032
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +2
Query: 458 PPXXXPPPPRGXRXXFXAPPPXPPXXXPPPPXPXXG--GXXPPP 583
PP P P PPP P PPPP P G G PPP
Sbjct: 736 PPAVIVPTPAPA--PIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +2
Query: 458 PPXXXPPPPRGXRXXFXAPPPXPPXXXPPPPXPXXGG 568
P PPPP A PP PP PPPP GG
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPP---PPPPAVSAGG 789
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 445 GGXXPPXKXPPPPAGXAVXFXGPPPXPP 528
GG PP PPPP V GPPP PP
Sbjct: 759 GGPPPP---PPPP---GVAGAGPPPPPP 780
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +2
Query: 461 PXXXPPPPRGXRXXFXAPPPXPPXXX----PPPPXP 556
P P PP PPP PP PPPP P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 10/35 (28%)
Frame = +2
Query: 509 APPPXPP----------XXXPPPPXPXXGGXXPPP 583
+PPP PP PPP P GG PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 305 GGXPPPPXXFFFXGAPXPPP 246
GG PPPP GA PPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPP 778
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 352 PLXXXGPXXXXXXXXPPPXXXXXFXPGXGGGGGXXPPXKXPPPPA 486
P+ P PPP PG G G PP PPPPA
Sbjct: 748 PIPVPPPAPIMGGPPPPPPP-----PGVAGAG---PPPPPPPPPA 784
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.7 bits (71), Expect = 0.074
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -2
Query: 600 GGXXXXGGGXXPPXXGXGGGGXXXGGXGGGAXKXNRXPRGGGGXFXGG 457
GG GG G GG G GG GG R RGG G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -2
Query: 600 GGXXXXGGGXXPPXXGXGGGGXXXGGXGGGAXKXNRXPRGGGGXFXGG 457
GG GG G GGG G G G + R RGG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 29.5 bits (63), Expect = 0.69
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 600 GGXXXXGGGXXPPXXGXGGGGXXXGGXGGGAXKXNRXPRGGGGXFXGG 457
GG GGG G GG G GGA GG G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -3
Query: 590 PGXGGXXPPXXGGXGXXGXVWGGXGGGPXXXTAXPAGGGGXXXGGK 453
PG G GG G GG GGG GG GG+
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR 50
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 510 PPPPPPPXXTXXPXAPXXGGXXPPPPXXGH 599
PPPPPPP P P PPPP G+
Sbjct: 9 PPPPPPPPGFEPPSQP------PPPPPPGY 32
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 458 PPXXXPPPPRGXRXXFXAPPPX--PPXXXPPPPXP 556
PP PPPP PPP PP PPPP P
Sbjct: 5 PPGNPPPPP---------PPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 449 GXXPPXXXPPPPRGXRXXFXAPPPXPP 529
G PP PPPP G PPP PP
Sbjct: 7 GNPPP---PPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 512 PPPXPPXXXPPPPXPXXGGXXPPP 583
PP PP PPP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +2
Query: 473 PPPPRGXRXXFXAPP-PXPPXXXPPPPXPXXGGXXPP 580
PPPP APP P P PPPP P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 457 PPXKXPPPPAGXAVXFXGPPPXPPXTXPXXPXP 555
PP PPPP+ + GPP PP P P
Sbjct: 1710 PPMSVPPPPSAPPMP-AGPPSAPPPPLPASSAP 1741
Score = 29.9 bits (64), Expect = 0.52
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +2
Query: 440 GGGGXXPPXXXPP--PPRGXRXXFXAP-PPXPPXXXPPPPXPXXGGXXPP 580
GG P PP P AP PP PP PPPP PP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Frame = +1
Query: 457 PPXKXPPPPAGXAVXFXGPPPXPPXTX--PXXPXPPXXGGXSP--PXPG 591
PP P P + PP PP P P PP +P P PG
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +3
Query: 510 PPPPPPPXXTXXPXA--PXXGGXX--PPPPXXGHXSP 608
P PPPPP P + P G PPPP +P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/46 (28%), Positives = 13/46 (28%)
Frame = +3
Query: 492 GGXXXGPPPPPPPXXTXXPXAPXXGGXXPPPPXXGHXSPPHXGXTP 629
GG P PP P PPPP PP P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +1
Query: 457 PPXKXPPPPAGXAVXFXGPPPXPPXTXPXXPXPPXXGG--XSPPXP 588
PP + P A + PPP P P PP G +PP P
Sbjct: 1690 PPVR-PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 474 PPPRGXGGXXXGPPPPPPPXXTXXPXAPXXGGXXPPPPXXGHXSPPHXGXTPP 632
P P+ G PPP P P + P P G P P G P P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAP-SSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP 1102
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 461 PXXXPPPPRGXRXXFXAPPPXPPXXXPPPPXPXXGGXXPPP 583
P PP P+ APPP P P P G P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 458 PPXXXPPPPRGXRXXFXAPPPXPPXXXPPPPXPXXG 565
PP PP P+ PP PP PP P P G
Sbjct: 1193 PPSEAPPVPK---PSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 29.5 bits (63), Expect = 0.69
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = +2
Query: 398 PPPXXXLXFXXAXGGGGGXXPPXXXPPPPRGXRXXFXAPPPXPPXXXPPPPXPXXGGXXP 577
P P + A G P PP P+ A PP P PP P G P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPS----VAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 578 PP 583
P
Sbjct: 1123 VP 1124
Score = 29.5 bits (63), Expect = 0.69
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +1
Query: 397 PPPXXXXXFXPGXGGGGGXXPPXKXPPPPAGXAVXFXGPPPXPPXTXPXXPXPPXXGGXS 576
P P P G PP PP +V PP PP T P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV--PPVPPPSTAPPVPTP---SAGL 1226
Query: 577 PPXP 588
PP P
Sbjct: 1227 PPVP 1230
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 507 GPPPPPPPXXTXXPXAPXXGGXXPPPPXXGHXSPPHXGXTPP 632
G PP PPP P G PPP P PP
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 507 GPPPPPPPXXTXXPXAPXXGGXXPPPPXXGHXSPP 611
G PP PPP + P P PP P +PP
Sbjct: 1206 GVPPVPPP--STAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 461 PXXXPPPPRGXRXXFXAPP-PXPPXXXPPPPXPXXGGXXPPP 583
P PP P+ APP P P PP P P G PP
Sbjct: 1155 PSGAPPVPK---PSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 457 PPXKXPPPPAGXAVXFXGPPPXPPXTXPXXPXPPXXGGXSPPXPGXA 597
PP P A G PP P + P P G P P A
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVA 1167
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.69
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Frame = +2
Query: 458 PPXXXPPPPRGXRXXFXAPPP----XPPXXXPPPPXPXXGGXXPPP 583
P PPPP + PPP P PPPP G PP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 248
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Frame = +3
Query: 474 PPPRGXGGXXXGPPPP----PPPXXTXXPXAPXXGGXXPPPPXXGHXSPPHXG 620
PPP PPPP P P G PPPP H H G
Sbjct: 300 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFKHHELEEHEG 352
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +3
Query: 516 PPPPPXXTXXPXAPXXGGXXPPPPXXGH-XSPPHXGXT--PP 632
PPPPP + AP PPPP G PP T PP
Sbjct: 908 PPPPPTASMTASAPAIAS--PPPPKVGETYHPPTASGTRVPP 947
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -2
Query: 555 GXGGGGXXXGGXGGGAXKXNRXPRGG-GGXFXGG 457
G GG G GG GG RGG GG GG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGG 169
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -2
Query: 600 GGXXXXGGGXXPPXXGXGGGGXXXGGXGGGAXKXNRXP-RGGG-GXFXG 460
GG GG G GGG GG GGG+ +R RGG G F G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSR-GGFGGGSRGGSRGGFRGGSRGGFRG 192
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 460 PXKXPPPPAGXAVXFXGPPPXPPXTXPXXPXP 555
P P PPA A P PP T P P
Sbjct: 899 PVAEPAPPAAPAKEVVEKAPSPPATRPKSTTP 930
Score = 23.8 bits (49), Expect(2) = 3.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 510 PPPPPPP 530
PPPPPPP
Sbjct: 190 PPPPPPP 196
Score = 21.4 bits (43), Expect(2) = 3.5
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +3
Query: 516 PPPPPXXTXXPXAPXXGGXXPPPP 587
P PP T P PPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 513 PPPPPPXXTXXPXAPXXGGXXPPPPXXGHXSPPHXGXTPP 632
PPPPPP P A PP PP PP
Sbjct: 206 PPPPPPQQNYPPAA---SSSAPPMQYQQTAYPPQQAPYPP 242
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 475 PPPAGXAVXFXGPPPXPPXTXPXXPXPPXXGGXSPPXP 588
PPPA A PP P P PP PP P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKV----PPPP 205
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/53 (24%), Positives = 14/53 (26%)
Frame = +1
Query: 430 GXGGGGGXXPPXKXPPPPAGXAVXFXGPPPXPPXTXPXXPXPPXXGGXSPPXP 588
G P PP P PP P P P +PP P
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 472 PPPPAGXAVXFXGPPPXPPXTXPXXPXPPXXGGXSPPXPG 591
PPPP A+ GPP P + PP PG
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPG 1921
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.152 0.543
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,694,903
Number of Sequences: 5004
Number of extensions: 31077
Number of successful extensions: 432
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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