Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_N05
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   8.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   8.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   8.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
 Frame = +1

Query: 253 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 432
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 433 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTV 549
            H  ++N     D  D  +  +R  V    P+ E ++ TV
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTV 175


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
 Frame = +1

Query: 253 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 432
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 433 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTV 549
            H  ++N     D  D  +  +R  V    P+ E ++ TV
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTV 175


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
 Frame = +1

Query: 253 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEP 432
           +D  + +++    A M+K+ E+M+   S +  +   N+ K          ++ S      
Sbjct: 81  LDGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNK-----IPEGANTTSTTKIID 135

Query: 433 SHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPE-EIVVKTV 549
            H  ++N     D  D  +  +R  V    P+ E ++ TV
Sbjct: 136 GHVVAINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTV 175


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 558 FVVDSLNNDLF 526
           F+VD L NDLF
Sbjct: 96  FIVDRLRNDLF 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,552
Number of Sequences: 438
Number of extensions: 3974
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)