Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_N04
(901 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 253 3e-67
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 253 3e-67
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 253 3e-67
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 253 3e-67
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 253 3e-67
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 2.8
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 2.8
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 253 bits (619), Expect = 3e-67
Identities = 120/128 (93%), Positives = 122/128 (95%)
Frame = +3
Query: 228 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 407
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 408 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 587
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 588 IGKPHTVP 611
IGKPHTVP
Sbjct: 157 IGKPHTVP 164
Score = 104 bits (249), Expect = 2e-22
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +1
Query: 616 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGHLGKF 777
KVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTSARGSTG LG F
Sbjct: 166 KVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 761 GTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTXSPYSXF 877
GTLGNF LTPDLW+++PL +PY +
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 253 bits (619), Expect = 3e-67
Identities = 120/128 (93%), Positives = 122/128 (95%)
Frame = +3
Query: 228 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 407
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 408 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 587
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 588 IGKPHTVP 611
IGKPHTVP
Sbjct: 157 IGKPHTVP 164
Score = 105 bits (252), Expect = 8e-23
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +1
Query: 616 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGHLGKF 777
KVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTG LG F
Sbjct: 166 KVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 761 GTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTXSPYSXF 877
GTLGNF LTPDLW+++PL +PY +
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 253 bits (619), Expect = 3e-67
Identities = 120/128 (93%), Positives = 122/128 (95%)
Frame = +3
Query: 228 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 407
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 408 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 587
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 588 IGKPHTVP 611
IGKPHTVP
Sbjct: 157 IGKPHTVP 164
Score = 105 bits (252), Expect = 8e-23
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +1
Query: 616 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGHLGKF 777
KVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTG LG F
Sbjct: 166 KVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 761 GTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTXSPYSXF 877
GTLGNF LTPDLW+++PL +PY +
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 253 bits (619), Expect = 3e-67
Identities = 120/128 (93%), Positives = 122/128 (95%)
Frame = +3
Query: 228 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 407
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 408 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 587
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 588 IGKPHTVP 611
IGKPHTVP
Sbjct: 157 IGKPHTVP 164
Score = 105 bits (252), Expect = 8e-23
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +1
Query: 616 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGHLGKF 777
KVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTG LG F
Sbjct: 166 KVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 761 GTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTXSPYSXF 877
GTLGNF LTPDLW+++PL +PY +
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 253 bits (619), Expect = 3e-67
Identities = 120/128 (93%), Positives = 122/128 (95%)
Frame = +3
Query: 228 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 407
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 408 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 587
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 588 IGKPHTVP 611
IGKPHTVP
Sbjct: 157 IGKPHTVP 164
Score = 105 bits (252), Expect = 8e-23
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +1
Query: 616 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGHLGKF 777
KVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTG LG F
Sbjct: 166 KVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 38.7 bits (86), Expect = 0.011
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 761 GTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTXSPYSXF 877
GTLGNF LTPDLW+++PL +PY +
Sbjct: 214 GTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 234 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 91
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 234 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 91
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,347,404
Number of Sequences: 53049
Number of extensions: 916621
Number of successful extensions: 3616
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3116
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -