Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_N03
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0259 - 1996427-1998772                                           31   1.2  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   3.6  
11_06_0198 - 21158350-21159528                                         28   8.3  
03_02_0950 + 12661008-12662312,12662403-12662576                       28   8.3  
02_05_0175 + 26490186-26490303,26490954-26491184,26491326-264914...    28   8.3  

>03_01_0259 - 1996427-1998772
          Length = 781

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +3

Query: 405 IFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSK 509
           I  ++ V++ N   HHALKLI + +  +I  GDSK
Sbjct: 732 ILVKKNVRICN-HCHHALKLISRYSGRRIVVGDSK 765


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 473 LVDQLEGVMVPFVYELDSLLGEDHSKLDG 387
           +V    GVM P + +L  LLGE+++KL G
Sbjct: 7   IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35


>11_06_0198 - 21158350-21159528
          Length = 392

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 202 ECRHW*IRXRYRQML*ISEGKEGRGYQGSREASDRKRQEEHH 327
           +CR W  R +  +   + E +E   Y G RE   RKR + HH
Sbjct: 275 DCRQW--RRQEEEEAAVDE-EEDHNYGGEREQHCRKRCQHHH 313


>03_02_0950 + 12661008-12662312,12662403-12662576
          Length = 492

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 176 DVLAEQLYMSVVIGEYEXAIAKCSEYLKEKKGEV 277
           +VL+ +      +GEY+ AIA CS+ L++ K  V
Sbjct: 411 EVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNV 444


>02_05_0175 +
           26490186-26490303,26490954-26491184,26491326-26491406,
           26491557-26491684
          Length = 185

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 394 WMGK*DLTIS-FPSFVHKLVGEVHGVPLAVFDQTLHGFLDNLSLLF 260
           W+G  D++   + SF+ KL G+ HG    +  +  + F D++   F
Sbjct: 75  WLGTTDMSHGEYRSFIEKLAGKYHGNSYHLVSKNCNHFTDDVCSFF 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,983,104
Number of Sequences: 37544
Number of extensions: 404957
Number of successful extensions: 1203
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)