Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_N03
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 33 0.26
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 32 0.60
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.1
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 3.2
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.2
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 4.2
AY724774-1|AAU21474.1| 750|Caenorhabditis elegans UNC-89-B prot... 29 4.2
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 4.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 4.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 4.2
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 4.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 4.2
Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z19158-3|CAA79572.2| 305|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z92813-7|CAB07283.2| 758|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 28 9.8
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 28 9.8
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 194 LYMSVVIGEYEXAIA-KCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQFMDKGW 361
LYM +G+Y+ A KC +Y K+ G+ EA++ I+ + + + +GW
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIKLTNQTLTKYGWN-PPEGW 142
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 545 PRCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 688
P TT S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 423 PDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 470
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 572 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPSMYESDV 724
TS PP TNS+ S++ V+ ++S+ + L + T TL+ S +S V
Sbjct: 223 TSTDPPPTTNSSNSTVESVTSVIPINSSTVPVLNTTLQTSTLAESSSQSVV 273
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 644 VSSTVIAPLTPSNTTGTLSPSMY 712
+ S IAPL PSN+ G LSPS++
Sbjct: 159 ILSPRIAPLMPSNSKGLLSPSIF 181
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 560 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 688
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 557 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 694
KTT FT+ P P T ST +S T V + S+T TP T T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTST 480
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3
Query: 312 ARGTPWTSPTSLWTKDGKEIVKSYFPIQFRVIFTEQ 419
A G P +PT W KDG+EIV P RVIFT++
Sbjct: 6061 ATGIP--TPTVKWYKDGQEIVGD-GPDGKRVIFTDE 6093
>AY724774-1|AAU21474.1| 750|Caenorhabditis elegans UNC-89-B
protein.
Length = 750
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3
Query: 312 ARGTPWTSPTSLWTKDGKEIVKSYFPIQFRVIFTEQ 419
A G P +PT W KDG+EIV P RVIFT++
Sbjct: 140 ATGIP--TPTVKWYKDGQEIVGD-GPDGKRVIFTDE 172
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3
Query: 312 ARGTPWTSPTSLWTKDGKEIVKSYFPIQFRVIFTEQ 419
A G P +PT W KDG+EIV P RVIFT++
Sbjct: 5421 ATGIP--TPTVKWYKDGQEIVGD-GPDGKRVIFTDE 5453
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3
Query: 312 ARGTPWTSPTSLWTKDGKEIVKSYFPIQFRVIFTEQ 419
A G P +PT W KDG+EIV P RVIFT++
Sbjct: 6061 ATGIP--TPTVKWYKDGQEIVGD-GPDGKRVIFTDE 6093
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3
Query: 312 ARGTPWTSPTSLWTKDGKEIVKSYFPIQFRVIFTEQ 419
A G P +PT W KDG+EIV P RVIFT++
Sbjct: 6061 ATGIP--TPTVKWYKDGQEIVGD-GPDGKRVIFTDE 6093
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3
Query: 312 ARGTPWTSPTSLWTKDGKEIVKSYFPIQFRVIFTEQ 419
A G P +PT W KDG+EIV P RVIFT++
Sbjct: 5421 ATGIP--TPTVKWYKDGQEIVGD-GPDGKRVIFTDE 5453
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +3
Query: 312 ARGTPWTSPTSLWTKDGKEIVKSYFPIQFRVIFTEQ 419
A G P +PT W KDG+EIV P RVIFT++
Sbjct: 6061 ATGIP--TPTVKWYKDGQEIVGD-GPDGKRVIFTDE 6093
>Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical
protein C01F6.2 protein.
Length = 487
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 512 QNQQESLLEVYPRCWKTTEFTSRSCPPRTNST*SSITRKV-LVMTVSSTVIAPLTPSN-T 685
Q+ Q+S + PRC T S+ P+T T I +KV + V+ I P+ P
Sbjct: 101 QDPQQSTVST-PRCLSPTNMGSKKSSPQTPKTPDVIRQKVPMNEPVNCVFIRPVIPKTIP 159
Query: 686 TGTLS-PSM-YESDVM 727
GT++ P++ E D++
Sbjct: 160 EGTVAVPNLNSEEDIL 175
>Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical
protein C15H7.4 protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 152 ATLAPXTDDVLAEQLYMSVVIGEYEXAIAKCSEYLKEKKGEVIKEAVKRLIENGK 316
AT +P + L ++ +V G E +A + EKK EV+ + +EN K
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKK 190
>Z19158-3|CAA79572.2| 305|Caenorhabditis elegans Hypothetical
protein T23G5.6 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 514 KPARKSPGSLPPXLENNRVYFKIMSTEDXQYLKLDNTKGSSD 639
KP +K P +PP N + I S E LK SSD
Sbjct: 106 KPYQKDPEPMPPICTNGNGFLDINSQEHENNLKRGYESDSSD 147
>Z92813-7|CAB07283.2| 758|Caenorhabditis elegans Hypothetical
protein T28A8.7 protein.
Length = 758
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -1
Query: 361 PSFVHKLVGEVHGVPLAVFDQTLHGFLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQ 182
PS VH V ++ +P + L+ D+ F I RA GD + TN T + +
Sbjct: 647 PSLVHYFVPQLEKLPFLIATLVLNVDYDDEQNTFRTICRAIGDLFTLDTNFITLDKKISA 706
Query: 181 YVISXW 164
+ + W
Sbjct: 707 FSATPW 712
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 197 YMSVVIGEYEXAIAKCSEYLKEKKGEVIK 283
Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 270 YVLMLCTLFEGGVEKCALYYPEKLGEVVK 298
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 197 YMSVVIGEYEXAIAKCSEYLKEKKGEVIK 283
Y+ ++ +E + KC+ Y EK GEV+K
Sbjct: 271 YVLMLCTLFEGGVEKCALYYPEKLGEVVK 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,476,553
Number of Sequences: 27780
Number of extensions: 341064
Number of successful extensions: 1303
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -