Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_N03
         (859 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    30   0.031
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    30   0.031
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   1.2  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   1.6  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   1.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   1.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   8.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   8.3  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 29.9 bits (64), Expect = 0.031
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 377 FDDFLSILCP*TGRRSPWCS 318
           FDD+++ L P T RR+PW S
Sbjct: 263 FDDYMASLTPDTNRRNPWFS 282


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 29.9 bits (64), Expect = 0.031
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 377 FDDFLSILCP*TGRRSPWCS 318
           FDD+++ L P T RR+PW S
Sbjct: 353 FDDYMASLTPDTNRRNPWFS 372


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 351 TKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIA 494
           T + K+I K   P + ++I     V ++   DH    L+D   +  IA
Sbjct: 124 TMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIA 171


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 230 AIAKCSEYLKEKKGEVIKEAVKRLIEN 310
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 230 AIAKCSEYLKEKKGEVIKEAVKRLIEN 310
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 230 AIAKCSEYLKEKKGEVIKEAVKRLIEN 310
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 18  ASPTRGLLTYFCVVCCLPF 74
           AS T G++    +VC LPF
Sbjct: 370 ASTTLGIIMSAFIVCWLPF 388


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 12/52 (23%), Positives = 19/52 (36%)
 Frame = +2

Query: 647 SSTVIAPLTPSNTTGTLSPSMYESDVMFFVYNREYNSVMTLDEXMAANEXRE 802
           SS ++ P++P      +SP   E       +  EY      D     N+  E
Sbjct: 315 SSGILTPVSPYGYVKPISPEQEELIHRLVYFQNEYEQPSEEDLKRITNQPSE 366


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,159
Number of Sequences: 438
Number of extensions: 4101
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)