Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M22
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical p...    28   7.7  
Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical p...    28   7.7  

>Z66500-13|CAA91312.1| 1780|Caenorhabditis elegans Hypothetical
           protein F10B5.7 protein.
          Length = 1780

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +2

Query: 428 YGYPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDY 607
           + YP N+G  ++   +   S+RP T K   C      S P T I     + RGG   ++ 
Sbjct: 104 FSYPVNRGYLRDYLLQ---SQRPSTSKPVDCSVLKRHSLPSTHILYEKTKHRGGVNIEEQ 160

Query: 608 KDTRRFPW 631
           +   R  W
Sbjct: 161 EKLVRMLW 168


>Z48334-10|CAA88315.1| 1780|Caenorhabditis elegans Hypothetical
           protein F10B5.7 protein.
          Length = 1780

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +2

Query: 428 YGYPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDY 607
           + YP N+G  ++   +   S+RP T K   C      S P T I     + RGG   ++ 
Sbjct: 104 FSYPVNRGYLRDYLLQ---SQRPSTSKPVDCSVLKRHSLPSTHILYEKTKHRGGVNIEEQ 160

Query: 608 KDTRRFPW 631
           +   R  W
Sbjct: 161 EKLVRMLW 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,465,887
Number of Sequences: 27780
Number of extensions: 306771
Number of successful extensions: 724
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)