Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M21
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase prote... 142 3e-34
L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase prote... 142 3e-34
L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase prote... 142 3e-34
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 31 1.5
>L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase protein
2, isoform c protein.
Length = 683
Score = 142 bits (344), Expect = 3e-34
Identities = 67/111 (60%), Positives = 81/111 (72%)
Frame = +3
Query: 63 LKSTGRHDIAAXANSYKHLLTPDNKAPYDQLIEIDLSTLEPHVNGPFTPDLANPISXLGE 242
L++TGR +IA A YK LLT D+ A YDQ+IEI+L TL PHVNGPFTPDLA+ I LGE
Sbjct: 210 LEATGRKEIAEEARKYKDLLTADDGANYDQIIEINLDTLTPHVNGPFTPDLASSIDKLGE 269
Query: 243 AAKXNXWPVDIRVGLIGSCTXSSYEDMGXCASXVKEAISHGLXSKIPFXVT 395
AK N WP+D++V LIGSCT SSYEDM AS K+A+ GL +K F +T
Sbjct: 270 NAKKNGWPLDVKVSLIGSCTNSSYEDMTRAASIAKQALDKGLKAKTIFTIT 320
Score = 36.7 bits (81), Expect = 0.023
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +1
Query: 397 PASXXVRATIXRDGXANTLTDFGRPVLXNXC 489
P S VRATI RDG + DFG VL N C
Sbjct: 321 PGSEQVRATIERDGLSKIFADFGGMVLANAC 351
>L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase protein
2, isoform b protein.
Length = 665
Score = 142 bits (344), Expect = 3e-34
Identities = 67/111 (60%), Positives = 81/111 (72%)
Frame = +3
Query: 63 LKSTGRHDIAAXANSYKHLLTPDNKAPYDQLIEIDLSTLEPHVNGPFTPDLANPISXLGE 242
L++TGR +IA A YK LLT D+ A YDQ+IEI+L TL PHVNGPFTPDLA+ I LGE
Sbjct: 192 LEATGRKEIAEEARKYKDLLTADDGANYDQIIEINLDTLTPHVNGPFTPDLASSIDKLGE 251
Query: 243 AAKXNXWPVDIRVGLIGSCTXSSYEDMGXCASXVKEAISHGLXSKIPFXVT 395
AK N WP+D++V LIGSCT SSYEDM AS K+A+ GL +K F +T
Sbjct: 252 NAKKNGWPLDVKVSLIGSCTNSSYEDMTRAASIAKQALDKGLKAKTIFTIT 302
Score = 36.7 bits (81), Expect = 0.023
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +1
Query: 397 PASXXVRATIXRDGXANTLTDFGRPVLXNXC 489
P S VRATI RDG + DFG VL N C
Sbjct: 303 PGSEQVRATIERDGLSKIFADFGGMVLANAC 333
>L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase protein
2, isoform a protein.
Length = 777
Score = 142 bits (344), Expect = 3e-34
Identities = 67/111 (60%), Positives = 81/111 (72%)
Frame = +3
Query: 63 LKSTGRHDIAAXANSYKHLLTPDNKAPYDQLIEIDLSTLEPHVNGPFTPDLANPISXLGE 242
L++TGR +IA A YK LLT D+ A YDQ+IEI+L TL PHVNGPFTPDLA+ I LGE
Sbjct: 304 LEATGRKEIAEEARKYKDLLTADDGANYDQIIEINLDTLTPHVNGPFTPDLASSIDKLGE 363
Query: 243 AAKXNXWPVDIRVGLIGSCTXSSYEDMGXCASXVKEAISHGLXSKIPFXVT 395
AK N WP+D++V LIGSCT SSYEDM AS K+A+ GL +K F +T
Sbjct: 364 NAKKNGWPLDVKVSLIGSCTNSSYEDMTRAASIAKQALDKGLKAKTIFTIT 414
Score = 36.7 bits (81), Expect = 0.023
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +1
Query: 397 PASXXVRATIXRDGXANTLTDFGRPVLXNXC 489
P S VRATI RDG + DFG VL N C
Sbjct: 415 PGSEQVRATIERDGLSKIFADFGGMVLANAC 445
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 63 LKSTGRHDIAAXANSYKHLLTPDNKAPYDQLIEIDLSTLEPHVNGPFTPDLANPI 227
+K++ HD S K ++ + P DQL DL T E + P+ A P+
Sbjct: 3828 IKTSDEHDKEQLILSLKLNISQFEQIPLDQLKSDDLKTAEKEITNSLKPEEAEPL 3882
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 63 LKSTGRHDIAAXANSYKHLLTPDNKAPYDQLIEIDLSTLEPHVNGPFTPDLANPI 227
+K++ HD S K ++ + P DQL DL T E + P+ A P+
Sbjct: 4782 IKTSDEHDKEQLILSLKLNISQFEQIPLDQLKSDDLKTAEKEITNSLKPEEAEPL 4836
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 63 LKSTGRHDIAAXANSYKHLLTPDNKAPYDQLIEIDLSTLEPHVNGPFTPDLANPI 227
+K++ HD S K ++ + P DQL DL T E + P+ A P+
Sbjct: 5685 IKTSDEHDKEQLILSLKLNISQFEQIPLDQLKSDDLKTAEKEITNSLKPEEAEPL 5739
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 63 LKSTGRHDIAAXANSYKHLLTPDNKAPYDQLIEIDLSTLEPHVNGPFTPDLANPI 227
+K++ HD S K ++ + P DQL DL T E + P+ A P+
Sbjct: 6588 IKTSDEHDKEQLILSLKLNISQFEQIPLDQLKSDDLKTAEKEITNSLKPEEAEPL 6642
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 63 LKSTGRHDIAAXANSYKHLLTPDNKAPYDQLIEIDLSTLEPHVNGPFTPDLANPI 227
+K++ HD S K ++ + P DQL DL T E + P+ A P+
Sbjct: 7491 IKTSDEHDKEQLILSLKLNISQFEQIPLDQLKSDDLKTAEKEITNSLKPEEAEPL 7545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,999,364
Number of Sequences: 27780
Number of extensions: 115573
Number of successful extensions: 291
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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