Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M18
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 69 7e-13
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 58 1e-09
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 50 3e-07
SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyc... 28 1.5
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 27 3.5
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 27 3.5
SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr 3||... 27 4.6
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 6.1
SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual 26 6.1
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 26 6.1
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 69.3 bits (162), Expect = 7e-13
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +1
Query: 505 PWVIWLQGGPGASSLTSLFNEIGPYKVTHKGNLLPY-PHTWLQNHSLVFIDNPIGTGFSF 681
P V+WL GGPG SSLT LF E+GP + + Y PH+W N S++F+D PI TGFS
Sbjct: 616 PVVLWLNGGPGCSSLTGLFMELGPSSINIETLKPEYNPHSWNSNASVIFLDQPINTGFSN 675
Query: 682 TD 687
D
Sbjct: 676 GD 677
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 58.4 bits (135), Expect = 1e-09
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +1
Query: 487 KPVKKTPWVIWLQGGPGASSLTSLFNEIGPYKVTHKGNLLPYPHTWLQNHSLVFIDNPIG 666
KP + ++WL GGPG SS E+GP+++ P W + +L+F+D P+G
Sbjct: 69 KPEYEHRSILWLNGGPGCSSEDGSLMEVGPFRLDDNNTFQLNPGRWDELGNLLFVDQPLG 128
Query: 667 TGFSFTDSED 696
TG+S++ ++D
Sbjct: 129 TGYSYSLAKD 138
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 50.4 bits (115), Expect = 3e-07
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 493 VKKTPWVIWLQGGPGASSLTSLFNEIGPYKVTHKG-NLLPYPHTWLQNHSLVFIDNPIGT 669
V +++WLQGGPG + F+E GP +++ + P +W +++++D P GT
Sbjct: 96 VDSETFIVWLQGGPGCAGTLGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGT 155
Query: 670 GFS 678
G+S
Sbjct: 156 GYS 158
>SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 313
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 515 ITHGVFFTGFFTNREVPEKRIRIV 444
+ +GV+ TGF T E EK +R+V
Sbjct: 179 VNNGVYKTGFATTAEAYEKNVRVV 202
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 599 IYCLTPTRGCKITRWCSSTTPSGLGSVL 682
I CL+ C + +W SS+ P+ + S L
Sbjct: 19 IICLSNLPNCPLDQWDSSSVPASISSTL 46
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 384 DRSLFFGYESYSGYFTVNKTYNSNSF-FWYFPVCEETSEKDTVGD 515
D LF+ ++SG N ++N++ F FW + ++ DT G+
Sbjct: 152 DAPLFYRSSNFSGNLQYNFSFNTDPFEFWITRIADDQVLFDTRGN 196
>SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 454
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 54 PLQSHVVLLFSCYXXXIKKNNXXVPKMXLLTCFL 155
P ++ +++++ CY IK PK+ ++T FL
Sbjct: 401 PEENIIIVVYVCYSESIKALAYIFPKVTIVTAFL 434
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 781 KLHHCMWXXSHTLVIRSSFGYAXSQAQRRP 870
++ H M S L +R+ FG+ S+ +RRP
Sbjct: 569 EIRHIMNADSQNLEVRAFFGWYLSKQKRRP 598
>SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 312
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 664 GTGFSFTDSEDGYVHDMDTYGHH 732
G F FTD +GY +DTY +H
Sbjct: 116 GPVFGFTDKFNGYGIFIDTYNNH 138
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 493 VKKTPWVIWLQGGPGASSLTSLFNEIGPYKVTHKGNLLPYPH 618
+++ PW L P S N G Y V K N+LP H
Sbjct: 2 LERCPWK--LISSPRNIPARSFLNSRGTYLVLRKSNILPLQH 41
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,051,739
Number of Sequences: 5004
Number of extensions: 57468
Number of successful extensions: 170
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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