Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M17
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0543 + 19272389-19272534,19273337-19273496,19273584-192737...    31   1.2  
10_07_0045 + 12328388-12328419,12328504-12328645,12328862-123290...    29   5.0  

>07_03_0543 +
           19272389-19272534,19273337-19273496,19273584-19273741,
           19273852-19273945,19274082-19274198,19275119-19275229,
           19275309-19275396,19275615-19275718,19275796-19275867,
           19275950-19276039,19276151-19276308,19276746-19276752,
           19277140-19277194,19277273-19277421,19277543-19277664,
           19277916-19278105
          Length = 606

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -1

Query: 484 EGNSAVYIGIAQRQSEPVTLVHKLNVVFCEYKSELNGEAIVNNVPWSLGARAGRRTPC-S 308
           E      +GI+ R++EP+  + K++ +F ++  ++  EA  +   WS+G +A +     +
Sbjct: 144 EAGKVYEVGIS-RKAEPLDHLKKMHTIFLKHLEKIVEEADADAQLWSVGHKADKLAAVRT 202

Query: 307 SSCFRI 290
            +CF I
Sbjct: 203 KNCFDI 208


>10_07_0045 +
           12328388-12328419,12328504-12328645,12328862-12329054,
           12329224-12329320,12329404-12329528,12329616-12329734,
           12331225-12331298,12331359-12331413,12331450-12331500,
           12331611-12331857,12331940-12332036,12332170-12332244,
           12334286-12334488,12334757-12334905,12334995-12335168,
           12335276-12335401,12335493-12335623,12335743-12335818,
           12335898-12336027,12336115-12336193,12336267-12336465,
           12336591-12336698,12336769-12337025,12337267-12337282
          Length = 984

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +1

Query: 292 YENKMNCMEYAYQLWLQGSKXHCSRLLPR*VQTYIRRKQ 408
           Y  ++NC E   ++W+Q S+ H   L  + +QT +++ +
Sbjct: 781 YIQQINCAEAMEKIWVQSSRPHYISLSLKQLQTILKKDE 819


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,942,480
Number of Sequences: 37544
Number of extensions: 293051
Number of successful extensions: 803
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)