Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M16
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    42   8e-06
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.7  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   9.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 41.5 bits (93), Expect = 8e-06
 Identities = 22/79 (27%), Positives = 36/79 (45%)
 Frame = +3

Query: 360 FSVFYDXXXXXAIALFHLFYYAKDFETFYXXACFARVHLNQGXFLYAFYIAVIQRSDCHG 539
           FS+F       A  L  +F  A+  +     A F R  +N   F YAF +A++ R D   
Sbjct: 80  FSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQN 139

Query: 540 FVVPAPYEVYPKMFMNXXV 596
             +P+   V+P  +++  V
Sbjct: 140 LDLPSFIHVFPDKYVDSQV 158



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 757 EDIGMNAYYYXFHSHLP 807
           EDIG+N +++ +H   P
Sbjct: 199 EDIGLNLHHWHWHLVYP 215


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 445 TXLPVLRVCIS 477
           T +PV+R+C+S
Sbjct: 477 TWMPVMRICVS 487


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 512 CYPAL*LPRFRCSCSV*SIP*NV 580
           CY  + L RFR S  +  IP NV
Sbjct: 40  CYVLVRLARFRDSVKLSKIPNNV 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,175
Number of Sequences: 336
Number of extensions: 1994
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)