Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M15
(841 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding p... 54 6e-07
AY094971-1|AAM15733.1| 354|Homo sapiens cellular retinaldehyde-... 54 6e-07
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 51 5e-06
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 51 5e-06
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 51 5e-06
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 44 5e-04
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 44 5e-04
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 44 5e-04
Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open readin... 41 0.005
AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open read... 41 0.005
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 39 0.026
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 39 0.026
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 39 0.026
>BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding
protein 1-like 1 protein.
Length = 354
Score = 54.0 bits (124), Expect = 6e-07
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 3/173 (1%)
Frame = +3
Query: 174 LSPDTKELAEKXLRETPXXXXXXXXXXXXXXXXXXXXYF-PDDDEILTIFLRPCKWYPES 350
LSP+T E A L E P F DD + FLR K++
Sbjct: 30 LSPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQAD 89
Query: 351 ALALMRRVAEFKRDNAHLLDGLLPEHE--KDAFLDHKVVNVMKGRDNKGRRVLIVSVGGS 524
A L+ + ++++ N + + K A +D V++ RD+ GR++L++ +
Sbjct: 90 AFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDG-FPGVLENRDHYGRKILLL-FAAN 147
Query: 525 WDPKKVXADXLFRLFYLIHLAAILEPESQVKGXVVIMDFYNMGWTXTXGLPPA 683
WD + + R L I +PE Q+ G ++I+D+ N + L P+
Sbjct: 148 WDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPS 200
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 674 TACXFKRLLTFIPXAMPLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
T K + + + P R VHFV P + ++ + KP + +K R F G+
Sbjct: 198 TPSILKLAIEGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGN 253
>AY094971-1|AAM15733.1| 354|Homo sapiens cellular
retinaldehyde-binding protein-like protein protein.
Length = 354
Score = 54.0 bits (124), Expect = 6e-07
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 3/173 (1%)
Frame = +3
Query: 174 LSPDTKELAEKXLRETPXXXXXXXXXXXXXXXXXXXXYF-PDDDEILTIFLRPCKWYPES 350
LSP+T E A L E P F DD + FLR K++
Sbjct: 30 LSPETIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQAD 89
Query: 351 ALALMRRVAEFKRDNAHLLDGLLPEHE--KDAFLDHKVVNVMKGRDNKGRRVLIVSVGGS 524
A L+ + ++++ N + + K A +D V++ RD+ GR++L++ +
Sbjct: 90 AFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDG-FPGVLENRDHYGRKILLL-FAAN 147
Query: 525 WDPKKVXADXLFRLFYLIHLAAILEPESQVKGXVVIMDFYNMGWTXTXGLPPA 683
WD + + R L I +PE Q+ G ++I+D+ N + L P+
Sbjct: 148 WDQSRNSFTDILRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPS 200
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 674 TACXFKRLLTFIPXAMPLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
T K + + + P R VHFV P + ++ + KP + +K R F G+
Sbjct: 198 TPSILKLAIEGLQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGN 253
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 51.2 bits (117), Expect = 5e-06
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 3/176 (1%)
Frame = +3
Query: 174 LSPDTKELAEKXLRETPXXXXXXXXXXXXXXXXXXXXYF-PDDDEILTIFLRPCKWYPES 350
LSP+T E A L E P F DD + FLR K++
Sbjct: 8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFE 67
Query: 351 ALALMRRVAEFKRDNAHLLDGLLPEHE--KDAFLDHKVVNVMKGRDNKGRRVLIVSVGGS 524
A L+ + E+++ N + K A D + D+ GR++L++ +
Sbjct: 68 AFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDG-FPGGLANLDHYGRKILVL-FAAN 125
Query: 525 WDPKKVXADXLFRLFYLIHLAAILEPESQVKGXVVIMDFYNMGWTXTXGLPPAFSR 692
WD + + R L A I +PE QV G V+I+D+ N + L P+ R
Sbjct: 126 WDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLR 181
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 51.2 bits (117), Expect = 5e-06
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 3/176 (1%)
Frame = +3
Query: 174 LSPDTKELAEKXLRETPXXXXXXXXXXXXXXXXXXXXYF-PDDDEILTIFLRPCKWYPES 350
LSP+T E A L E P F DD + FLR K++
Sbjct: 8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFE 67
Query: 351 ALALMRRVAEFKRDNAHLLDGLLPEHE--KDAFLDHKVVNVMKGRDNKGRRVLIVSVGGS 524
A L+ + E+++ N + K A D + D+ GR++L++ +
Sbjct: 68 AFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDG-FPGGLANLDHYGRKILVL-FAAN 125
Query: 525 WDPKKVXADXLFRLFYLIHLAAILEPESQVKGXVVIMDFYNMGWTXTXGLPPAFSR 692
WD + + R L A I +PE QV G V+I+D+ N + L P+ R
Sbjct: 126 WDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLR 181
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 51.2 bits (117), Expect = 5e-06
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 3/176 (1%)
Frame = +3
Query: 174 LSPDTKELAEKXLRETPXXXXXXXXXXXXXXXXXXXXYF-PDDDEILTIFLRPCKWYPES 350
LSP+T E A L E P F DD + FLR K++
Sbjct: 8 LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHFE 67
Query: 351 ALALMRRVAEFKRDNAHLLDGLLPEHE--KDAFLDHKVVNVMKGRDNKGRRVLIVSVGGS 524
A L+ + E+++ N + K A D + D+ GR++L++ +
Sbjct: 68 AFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDG-FPGGLANLDHYGRKILVL-FAAN 125
Query: 525 WDPKKVXADXLFRLFYLIHLAAILEPESQVKGXVVIMDFYNMGWTXTXGLPPAFSR 692
WD + + R L A I +PE QV G V+I+D+ N + L P+ R
Sbjct: 126 WDQSRYTLVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLR 181
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 44.4 bits (100), Expect = 5e-04
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 689 KRLLTFIPXAMPLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
K+++ + P+R+K VH V P IF ++ + KP + EK NR F GS
Sbjct: 206 KKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGS 256
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 44.4 bits (100), Expect = 5e-04
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 689 KRLLTFIPXAMPLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
K+++ + P+R+K VH V P IF ++ + KP + EK NR F GS
Sbjct: 206 KKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGS 256
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 44.4 bits (100), Expect = 5e-04
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 689 KRLLTFIPXAMPLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
K+++ + P+R+K VH V P IF ++ + KP + EK NR F GS
Sbjct: 206 KKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGS 256
>Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 722 PLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
P+R+K VH V P IF ++ + KP + EK NR F GS
Sbjct: 183 PIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGS 222
>AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 722 PLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
P+R+K VH V P IF ++ + KP + EK NR F GS
Sbjct: 183 PIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGS 222
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 38.7 bits (86), Expect = 0.026
Identities = 32/134 (23%), Positives = 56/134 (41%)
Frame = +3
Query: 291 PDDDEILTIFLRPCKWYPESALALMRRVAEFKRDNAHLLDGLLPEHEKDAFLDHKVVNVM 470
P D L FLR + + A L++ +++ + + L P L V+
Sbjct: 46 PLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPR-SIIGLLKAGYHGVL 104
Query: 471 KGRDNKGRRVLIVSVGGSWDPKKVXADXLFRLFYLIHLAAILEPESQVKGXVVIMDFYNM 650
+ RD G +VLI + WDPK A +FR+ + + E E+Q G I D
Sbjct: 105 RSRDPTGSKVLIYRIA-HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGW 163
Query: 651 GWTXTXGLPPAFSR 692
++ + P+ ++
Sbjct: 164 QFSHAFQITPSVAK 177
Score = 38.7 bits (86), Expect = 0.026
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 689 KRLLTFIPXAMPLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
K++ + + PL+++ +H + P IF+ V+ M KP + EK R G+
Sbjct: 177 KKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGN 227
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 38.7 bits (86), Expect = 0.026
Identities = 32/134 (23%), Positives = 56/134 (41%)
Frame = +3
Query: 291 PDDDEILTIFLRPCKWYPESALALMRRVAEFKRDNAHLLDGLLPEHEKDAFLDHKVVNVM 470
P D L FLR + + A L++ +++ + + L P L V+
Sbjct: 46 PLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPR-SIIGLLKAGYHGVL 104
Query: 471 KGRDNKGRRVLIVSVGGSWDPKKVXADXLFRLFYLIHLAAILEPESQVKGXVVIMDFYNM 650
+ RD G +VLI + WDPK A +FR+ + + E E+Q G I D
Sbjct: 105 RSRDPTGSKVLIYRIA-HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGW 163
Query: 651 GWTXTXGLPPAFSR 692
++ + P+ ++
Sbjct: 164 QFSHAFQITPSVAK 177
Score = 38.7 bits (86), Expect = 0.026
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 689 KRLLTFIPXAMPLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
K++ + + PL+++ +H + P IF+ V+ M KP + EK R G+
Sbjct: 177 KKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGN 227
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 38.7 bits (86), Expect = 0.026
Identities = 32/134 (23%), Positives = 56/134 (41%)
Frame = +3
Query: 291 PDDDEILTIFLRPCKWYPESALALMRRVAEFKRDNAHLLDGLLPEHEKDAFLDHKVVNVM 470
P D L FLR + + A L++ +++ + + L P L V+
Sbjct: 46 PLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPR-SIIGLLKAGYHGVL 104
Query: 471 KGRDNKGRRVLIVSVGGSWDPKKVXADXLFRLFYLIHLAAILEPESQVKGXVVIMDFYNM 650
+ RD G +VLI + WDPK A +FR+ + + E E+Q G I D
Sbjct: 105 RSRDPTGSKVLIYRIA-HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGW 163
Query: 651 GWTXTXGLPPAFSR 692
++ + P+ ++
Sbjct: 164 QFSHAFQITPSVAK 177
Score = 38.7 bits (86), Expect = 0.026
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 689 KRLLTFIPXAMPLRLKEVHFVXXPXIFNVVWXMFKPSIXEKXXNRXFXPGS 841
K++ + + PL+++ +H + P IF+ V+ M KP + EK R G+
Sbjct: 177 KKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGN 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,229,996
Number of Sequences: 237096
Number of extensions: 2039911
Number of successful extensions: 3730
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3730
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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