Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M14
(865 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 49 1e-04
UniRef50_A2YRX2 Cluster: Putative uncharacterized protein; n=2; ... 49 2e-04
UniRef50_UPI000155314F Cluster: PREDICTED: similar to ubiquitin ... 46 0.001
UniRef50_UPI00006CFD8F Cluster: Ubiquitin family protein; n=1; T... 46 0.001
UniRef50_Q9WR81 Cluster: Polyprotein; n=31; root|Rep: Polyprotei... 46 0.001
UniRef50_Q9WR79 Cluster: Polyprotein; n=3; Bovine viral diarrhea... 46 0.001
UniRef50_Q9E2W4 Cluster: Polyprotein; n=1; Bovine viral diarrhea... 46 0.001
UniRef50_A0PDJ3 Cluster: Polyprotein; n=65; root|Rep: Polyprotei... 46 0.001
UniRef50_A0CI21 Cluster: Chromosome undetermined scaffold_187, w... 46 0.001
UniRef50_A6SBB4 Cluster: 60S ribosomal protein L40; n=1; Botryot... 46 0.001
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 45 0.002
UniRef50_Q0WRN6 Cluster: Polyubiquitin 4 UBQ4; n=6; Eukaryota|Re... 45 0.002
UniRef50_Q868B2 Cluster: Polyubiquitin; n=3; Eukaryota|Rep: Poly... 42 0.015
UniRef50_Q54V68 Cluster: Putative uncharacterized protein; n=3; ... 42 0.020
UniRef50_Q7XB26 Cluster: Ubiquitin/actin fusion protein 4; n=1; ... 41 0.035
UniRef50_Q91BI7 Cluster: Ubiquitin GP37 fusion protein; n=2; Spo... 41 0.046
UniRef50_Q6WMU7 Cluster: Ubiquitin-like protein Ublp94.4; n=1; A... 41 0.046
UniRef50_P16709 Cluster: Ubiquitin-like protein precursor; n=19;... 40 0.081
UniRef50_Q9YMT1 Cluster: Viral ubiquitin; n=1; Lymantria dispar ... 40 0.11
UniRef50_A1TWA7 Cluster: Ubiquitin precursor; n=1; Acidovorax av... 40 0.11
UniRef50_Q7RJC6 Cluster: Ubiquitin; n=1; Plasmodium yoelii yoeli... 39 0.19
UniRef50_Q6ZCA5 Cluster: Monoubiquitin/carboxy-extension protein... 38 0.25
UniRef50_Q22T79 Cluster: Ubiquitin family protein; n=1; Tetrahym... 38 0.25
UniRef50_Q9SHE7 Cluster: NEDD8-like protein RUB1 precursor; n=19... 36 1.0
UniRef50_Q9VJ33 Cluster: NEDD8 precursor; n=546; root|Rep: NEDD8... 34 4.0
UniRef50_UPI000155E27A Cluster: PREDICTED: similar to ubiquitin ... 34 5.3
UniRef50_A7APS7 Cluster: Ubiquitin family protein; n=1; Babesia ... 34 5.3
UniRef50_Q0C9H7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q7T2M5 Cluster: Ubquitin-like protein 2; n=8; Clupeocep... 33 9.3
UniRef50_Q5KK31 Cluster: Ribosomal chaperone, putative; n=1; Fil... 33 9.3
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1
Query: 607 SALMXRPXPGERRFAYWALFRFLAH 681
+ALM RP GERRFAYWALFRFLAH
Sbjct: 25 AALMNRPTRGERRFAYWALFRFLAH 49
>UniRef50_A2YRX2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 324
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/47 (55%), Positives = 27/47 (57%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGGXXXCXF*KLXYL 222
RL FAG L GRTL+ NIQ S LHLVL LRGG C YL
Sbjct: 276 RLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGLWACSIGSPFYL 322
>UniRef50_UPI000155314F Cluster: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1; n=3;
Euarchontoglires|Rep: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1 - Mus
musculus
Length = 203
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 119 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 153
>UniRef50_UPI00006CFD8F Cluster: Ubiquitin family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ubiquitin family
protein - Tetrahymena thermophila SB210
Length = 1252
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 1065 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1099
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 1141 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1175
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 1217 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1251
>UniRef50_Q9WR81 Cluster: Polyprotein; n=31; root|Rep: Polyprotein -
Bovine viral diarrhea virus 2 (BVDV-2)
Length = 432
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 265 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 299
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 341 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 375
>UniRef50_Q9WR79 Cluster: Polyprotein; n=3; Bovine viral diarrhea
virus 2|Rep: Polyprotein - Bovine viral diarrhea virus 2
(BVDV-2)
Length = 261
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 170 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 204
>UniRef50_Q9E2W4 Cluster: Polyprotein; n=1; Bovine viral diarrhea
virus type 2|Rep: Polyprotein - Bovine viral diarrhea
virus type 2
Length = 636
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 320 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 354
Score = 36.3 bits (80), Expect = 1.0
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL AG L GRTLS IQ S L+L L LRGG
Sbjct: 396 RLILAGKQLEDGRTLSAYKIQKESTLYLGLRLRGG 430
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL F RTLS NIQ S LHL L LRGG
Sbjct: 472 RLIFPANKREDARTLSDYNIQKESTLHLFLRLRGG 506
>UniRef50_A0PDJ3 Cluster: Polyprotein; n=65; root|Rep: Polyprotein -
Bovine viral diarrhea virus (BVDV) (Mucosal disease
virus)
Length = 630
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 363 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 397
>UniRef50_A0CI21 Cluster: Chromosome undetermined scaffold_187,
whole genome shotgun sequence; n=2; Eukaryota|Rep:
Chromosome undetermined scaffold_187, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 271
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 42 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>UniRef50_A6SBB4 Cluster: 60S ribosomal protein L40; n=1;
Botryotinia fuckeliana B05.10|Rep: 60S ribosomal protein
L40 - Botryotinia fuckeliana B05.10
Length = 607
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 521 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 555
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTL+ NIQ S LHLVL LRGG
Sbjct: 44 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 78
>UniRef50_Q0WRN6 Cluster: Polyubiquitin 4 UBQ4; n=6; Eukaryota|Rep:
Polyubiquitin 4 UBQ4 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 351
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTL+ NIQ S LHLVL LRGG
Sbjct: 42 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTL+ NIQ S LHLVL LRGG
Sbjct: 118 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTL+ NIQ S LHLVL LRGG
Sbjct: 239 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 273
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTL+ NIQ S LHLVL LRGG
Sbjct: 315 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 349
>UniRef50_Q868B2 Cluster: Polyubiquitin; n=3; Eukaryota|Rep:
Polyubiquitin - Euglypha rotunda
Length = 177
Score = 42.3 bits (95), Expect = 0.015
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS N+ + LHLVL LRGG
Sbjct: 35 RLIFAGKQLEDGRTLSDYNVTKEATLHLVLRLRGG 69
Score = 42.3 bits (95), Expect = 0.015
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS N+ + LHLVL LRGG
Sbjct: 113 RLIFAGKQLEDGRTLSDYNVTKEATLHLVLRLRGG 147
>UniRef50_Q54V68 Cluster: Putative uncharacterized protein; n=3;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 314
Score = 41.9 bits (94), Expect = 0.020
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +1
Query: 58 RAFLRXXXRLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
+ L RL +AG L GR+L NIQ S LHLVL LRGG
Sbjct: 99 QGILEDQQRLLYAGKQLEDGRSLFEYNIQKESTLHLVLRLRGG 141
>UniRef50_Q7XB26 Cluster: Ubiquitin/actin fusion protein 4; n=1;
Bigelowiella natans|Rep: Ubiquitin/actin fusion protein
4 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 234
Score = 41.1 bits (92), Expect = 0.035
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTL+ NIQ S LH VL +RGG
Sbjct: 35 RLIFAGKQLEDGRTLAHCNIQNESTLHGVLGIRGG 69
>UniRef50_Q91BI7 Cluster: Ubiquitin GP37 fusion protein; n=2;
Spodoptera litura NPV|Rep: Ubiquitin GP37 fusion protein
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 351
Score = 40.7 bits (91), Expect = 0.046
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L T+S NIQ S LHLVL LRGG
Sbjct: 61 RLIFAGKQLEDSMTMSDYNIQKESTLHLVLRLRGG 95
>UniRef50_Q6WMU7 Cluster: Ubiquitin-like protein Ublp94.4; n=1;
Acanthamoeba castellanii|Rep: Ubiquitin-like protein
Ublp94.4 - Acanthamoeba castellanii (Amoeba)
Length = 853
Score = 40.7 bits (91), Expect = 0.046
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRG 183
RL FAG L RTL+ NIQ S LHLVL LRG
Sbjct: 382 RLIFAGKQLEESRTLAEYNIQKESTLHLVLRLRG 415
>UniRef50_P16709 Cluster: Ubiquitin-like protein precursor; n=19;
root|Rep: Ubiquitin-like protein precursor - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 77
Score = 39.9 bits (89), Expect = 0.081
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L +T++ NIQ S LH+VL LRGG
Sbjct: 42 RLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
>UniRef50_Q9YMT1 Cluster: Viral ubiquitin; n=1; Lymantria dispar
MNPV|Rep: Viral ubiquitin - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 150
Score = 39.5 bits (88), Expect = 0.11
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL +AG L RTL+ NIQ + LHLVL LRGG
Sbjct: 42 RLIYAGKQLDDERTLNDYNIQKEATLHLVLRLRGG 76
>UniRef50_A1TWA7 Cluster: Ubiquitin precursor; n=1; Acidovorax
avenae subsp. citrulli AAC00-1|Rep: Ubiquitin precursor
- Acidovorax avenae subsp. citrulli (strain AAC00-1)
Length = 287
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/32 (65%), Positives = 21/32 (65%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXL 177
RL FAG L GRTLS NIQ S LHLVL L
Sbjct: 81 RLIFAGKQLEDGRTLSDYNIQKDSTLHLVLRL 112
>UniRef50_Q7RJC6 Cluster: Ubiquitin; n=1; Plasmodium yoelii
yoelii|Rep: Ubiquitin - Plasmodium yoelii yoelii
Length = 162
Score = 38.7 bits (86), Expect = 0.19
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXL 177
RL FAG L GRTLS NIQ S LHLV+ L
Sbjct: 77 RLIFAGKQLEDGRTLSDYNIQKESTLHLVIYL 108
>UniRef50_Q6ZCA5 Cluster: Monoubiquitin/carboxy-extension protein
fusion-like; n=2; Oryza sativa|Rep:
Monoubiquitin/carboxy-extension protein fusion-like -
Oryza sativa subsp. japonica (Rice)
Length = 212
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTL+ I+ + LHL L LRGG
Sbjct: 42 RLMFAGRHLEDGRTLAEYGIKKEANLHLALRLRGG 76
>UniRef50_Q22T79 Cluster: Ubiquitin family protein; n=1; Tetrahymena
thermophila SB210|Rep: Ubiquitin family protein -
Tetrahymena thermophila SB210
Length = 564
Score = 38.3 bits (85), Expect = 0.25
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL F G L G TLS NIQ S +HLVL RGG
Sbjct: 325 RLIFPGKILENGYTLSDYNIQNGSTIHLVLCQRGG 359
>UniRef50_Q9SHE7 Cluster: NEDD8-like protein RUB1 precursor; n=19;
Eukaryota|Rep: NEDD8-like protein RUB1 precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 80
Score = 36.3 bits (80), Expect = 1.0
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL +AG L +T NI+ S LHLVL LRGG
Sbjct: 42 RLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76
>UniRef50_Q9VJ33 Cluster: NEDD8 precursor; n=546; root|Rep: NEDD8
precursor - Drosophila melanogaster (Fruit fly)
Length = 84
Score = 34.3 bits (75), Expect = 4.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL F+G + +T + +Q S LHLVL LRGG
Sbjct: 42 RLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGG 76
>UniRef50_UPI000155E27A Cluster: PREDICTED: similar to ubiquitin
A-52 residue ribosomal protein fusion product 1; n=1;
Equus caballus|Rep: PREDICTED: similar to ubiquitin A-52
residue ribosomal protein fusion product 1 - Equus
caballus
Length = 141
Score = 33.9 bits (74), Expect = 5.3
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +1
Query: 85 LXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
L F G L GRT S NIQ S L+L+L L GG
Sbjct: 35 LAFVGTHLEDGRTRSDYNIQKKSTLNLLLCLSGG 68
>UniRef50_A7APS7 Cluster: Ubiquitin family protein; n=1; Babesia
bovis|Rep: Ubiquitin family protein - Babesia bovis
Length = 163
Score = 33.9 bits (74), Expect = 5.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
R+ + G L +TL+ NIQ + +H+VL LRGG
Sbjct: 129 RIIYQGKMLQDHKTLAEYNIQNNAVIHMVLRLRGG 163
>UniRef50_Q0C9H7 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 115
Score = 33.5 bits (73), Expect = 7.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL F G + +T + N++ + LHLVL LRGG
Sbjct: 80 RLIFGGKQMADDKTAAEYNLEGGATLHLVLALRGG 114
>UniRef50_Q7T2M5 Cluster: Ubquitin-like protein 2; n=8;
Clupeocephala|Rep: Ubquitin-like protein 2 - Carassius
auratus (Goldfish)
Length = 161
Score = 33.1 bits (72), Expect = 9.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL ++G L AG+ L NI S +++ L LRGG
Sbjct: 127 RLIYSGKQLEAGKKLQDYNITSGSIIYMALRLRGG 161
>UniRef50_Q5KK31 Cluster: Ribosomal chaperone, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal chaperone,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 88
Score = 33.1 bits (72), Expect = 9.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL F G + +T+ IQ + +HLVL LRGG
Sbjct: 48 RLIFGGKAMGDDKTIQDYKIQAGAAIHLVLALRGG 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,565,260
Number of Sequences: 1657284
Number of extensions: 4107005
Number of successful extensions: 3251
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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