Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M14
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 46 3e-05
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 46 3e-05
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 46 3e-05
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 46 3e-05
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 33 0.35
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 42 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 42 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 194 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 270 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 346 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 422 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 42 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 194 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 270 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 346 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 422 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 498 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 574 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 650 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 726 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 802 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 42 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 118 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 194 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 270 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 346 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 422 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 498 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 574 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 650 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 726 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 802 RLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGG 836
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/35 (68%), Positives = 24/35 (68%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG L GRTLS NIQ S LHLVL LRGG
Sbjct: 42 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 82 RLXFAGXXLXAGRTLSXXNIQXXSXLHLVLXLRGG 186
RL FAG + +T + + S LHLVL LRGG
Sbjct: 42 RLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,007,493
Number of Sequences: 27780
Number of extensions: 99081
Number of successful extensions: 87
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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