Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M13
         (920 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   5.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   7.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/43 (27%), Positives = 13/43 (30%)
 Frame = -1

Query: 482 PPPPXXXXPXKXXXPXPXAPXXTPPPXXXPXXXPXXPXXTPPP 354
           PPP       K   P   +P   P P   P   P     T  P
Sbjct: 52  PPPLADAAVGKGFHPWKKSPQGAPSPSSTPSSLPTQRTSTSNP 94


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -1

Query: 599 PPPXXPPPXXXPPXPXXXXAPPPP 528
           PP    PP   P  P    A P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -1

Query: 599 PPPXXPPPXXXPPXPXXXXAPPPP 528
           PP    PP   P  P    A P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -1

Query: 599 PPPXXPPPXXXPPXPXXXXAPPPP 528
           PP    PP   P  P    A P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -1

Query: 599 PPPXXPPPXXXPPXPXXXXAPPPP 528
           PP    PP   P  P    A P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -1

Query: 599 PPPXXPPPXXXPPXPXXXXAPPPP 528
           PP    PP   P  P    A P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -1

Query: 599 PPPXXPPPXXXPPXPXXXXAPPPP 528
           PP    PP   P  P    A P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -1

Query: 599 PPPXXPPPXXXPPXPXXXXAPPPP 528
           PP    PP   P  P    A P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -1

Query: 599 PPPXXPPPXXXPPXPXXXXAPPPP 528
           PP    PP   P  P    A P P
Sbjct: 39  PPACYSPPQVAPQYPQHPYAAPAP 62


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 436 NPXPPXPPPP 407
           N  PP PPPP
Sbjct: 728 NNAPPPPPPP 737


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/33 (30%), Positives = 10/33 (30%)
 Frame = -1

Query: 659 PXXXPPXXXXPPPXXXXXXXPPPXXPPPXXXPP 561
           P    P    PP        PP    PP   PP
Sbjct: 155 PSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPP 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,666
Number of Sequences: 336
Number of extensions: 3859
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)