Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M12
         (899 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.048
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.78 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.1 bits (67), Expect = 0.048
 Identities = 24/86 (27%), Positives = 28/86 (32%), Gaps = 9/86 (10%)
 Frame = +3

Query: 528 PPGGXXGGXKNFFXXKXXPPPXXPPXXXFLKKXP---PPPXGXF---FFXXXXKK---KX 680
           PP G     ++       PPP  PP    L   P   PPP       FF     +     
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPA 571

Query: 681 XXPPPPXXKKKKXXPPPXGXXPPPPP 758
             P  P  +     PPP    PPP P
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSP 597



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 8/68 (11%)
 Frame = +2

Query: 581 PPPXXXPXXXFFKKXP---PPPXGXFF--FFXXXKKKXXXP---PPPPXKKKKXXPPPXG 736
           PPP   P        P   PPP       FF     +   P   P  P  +    PPP  
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589

Query: 737 XXXPPPPP 760
              PPP P
Sbjct: 590 PMGPPPSP 597


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -3

Query: 759 GGGGGXXXPXGGGXFFFFXXGGGGG 685
           GGGGG     G G       GGGGG
Sbjct: 657 GGGGGGGGSVGSGGIGSSSLGGGGG 681


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -3

Query: 759 GGGGGXXXPXGGGXFFFFXXGGGGG 685
           GGG G   P GGG        GGGG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -3

Query: 759 GGGGGXXXPXGGGXFFFFXXGGGGG 685
           GG GG     GGG       GGGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 23.8 bits (49), Expect = 7.2
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +1

Query: 688 PPPPXXKKKKXXPPXGGXXPPPPP 759
           P PP         P  G  P PPP
Sbjct: 599 PQPPAGSSLNLSHPSAGMVPQPPP 622



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 687 PPPPXXKKKKXXPPPXGXXPPPPP 758
           P PP         P  G  P PPP
Sbjct: 599 PQPPAGSSLNLSHPSAGMVPQPPP 622



 Score = 22.6 bits (46), Expect(2) = 2.6
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 643 PXGGGGXFFKKXXXGGXXGGG 581
           P GGGG        GG  GGG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGG 232



 Score = 20.6 bits (41), Expect(2) = 2.6
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -2

Query: 757 GGGGGXXPXGGGXXF 713
           GGGGG    GG   F
Sbjct: 168 GGGGGGGGGGGAGSF 182


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 759 GGGGGXXXPXGGGXFFFFXXGGGG 688
           GGG G     GGG       GGGG
Sbjct: 683 GGGAGSSGGSGGGLASGSPYGGGG 706


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,884
Number of Sequences: 2352
Number of extensions: 15436
Number of successful extensions: 83
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)