Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M11
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0862 - 7172083-7172931                                           31   0.94 
03_05_1075 - 30174725-30175363                                         29   6.7  

>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
 Frame = +2

Query: 695 PXXXYKDTXXFPPXXXPRAXXLFRPCPXTGIPVP---PFPLPGKRXXFXIXSPXXXSPLP 865
           P    K    FPP   PR   +  P P      P   P PLP K+      SP    PLP
Sbjct: 136 PTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPSPPPQPPLP 195

Query: 866 X*XXSP 883
               +P
Sbjct: 196 EKENTP 201


>03_05_1075 - 30174725-30175363
          Length = 212

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 731 PXXXPRAXXLFRPCPXTGIPVPPFPLPGKR 820
           P   P    LF P P   +P PP P P +R
Sbjct: 86  PPGAPAPPRLFEPLPEPLLPQPPPPAPARR 115


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,663,203
Number of Sequences: 37544
Number of extensions: 261423
Number of successful extensions: 655
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)