Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M11
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.             31   4.3  
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.             31   4.3  
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.             31   4.3  
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.             31   4.3  
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.     31   4.3  

>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
          Length = 1865

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 728  PPXXXPRAXXL-FRPCPXTGIPVPPFPLPGKRXXFXIXSPXXXSPLP 865
            PP   P A  L   P P  GIP PP PLPG         P    PLP
Sbjct: 1065 PPPPLPGAGILPLPPLPGAGIPPPP-PLPGAAIPPPPPLPGAGIPLP 1110


>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
          Length = 1865

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 728  PPXXXPRAXXL-FRPCPXTGIPVPPFPLPGKRXXFXIXSPXXXSPLP 865
            PP   P A  L   P P  GIP PP PLPG         P    PLP
Sbjct: 1065 PPPPLPGAGILPLPPLPGAGIPPPP-PLPGAAIPPPPPLPGAGIPLP 1110


>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
          Length = 1865

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 728  PPXXXPRAXXL-FRPCPXTGIPVPPFPLPGKRXXFXIXSPXXXSPLP 865
            PP   P A  L   P P  GIP PP PLPG         P    PLP
Sbjct: 1065 PPPPLPGAGILPLPPLPGAGIPPPP-PLPGAAIPPPPPLPGAGIPLP 1110


>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
          Length = 1865

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 728  PPXXXPRAXXL-FRPCPXTGIPVPPFPLPGKRXXFXIXSPXXXSPLP 865
            PP   P A  L   P P  GIP PP PLPG         P    PLP
Sbjct: 1065 PPPPLPGAGILPLPPLPGAGIPPPP-PLPGAAIPPPPPLPGAGIPLP 1110


>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
          Length = 1332

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 728 PPXXXPRAXXL-FRPCPXTGIPVPPFPLPGKRXXFXIXSPXXXSPLP 865
           PP   P A  L   P P  GIP PP PLPG         P    PLP
Sbjct: 532 PPPPLPGAGILPLPPLPGAGIPPPP-PLPGAAIPPPPPLPGAGIPLP 577


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,259,994
Number of Sequences: 237096
Number of extensions: 1385274
Number of successful extensions: 3277
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3225
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)