Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M10
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0659 - 5021159-5021266,5021364-5021494,5021619-5021785,502...    31   0.92 
05_03_0515 + 14930736-14932697                                         30   2.8  
04_04_0347 + 24564589-24565296                                         29   3.7  
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152...    29   4.9  
04_04_1650 - 35051728-35051823,35052054-35052162,35052270-350524...    28   8.6  

>01_01_0659 -
           5021159-5021266,5021364-5021494,5021619-5021785,
           5021950-5022065,5022226-5022381,5022570-5022678,
           5023153-5023262,5023807-5023992,5024077-5024667
          Length = 557

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 301 IINEGRVEGDKYQISIHLPGYEQKDXNVK 387
           ++ E +VEGD Y + +H PG+  K  +V+
Sbjct: 220 VVKEEKVEGDGYSLGLHAPGFFDKVLHVE 248


>05_03_0515 + 14930736-14932697
          Length = 653

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 87  IALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESM-LDTHSLWSNLANEMQHLD 263
           + L +C +   V  +P  +    +W YH     + YV +S+  ++ S WSN   +   L 
Sbjct: 308 LCLEVCAIFFMVMMSPWTWASLQYWKYHRLADAAWYVFKSLQTESMSWWSNSLGQYNFLS 367

Query: 264 DMMKE 278
               +
Sbjct: 368 SCFSD 372


>04_04_0347 + 24564589-24565296
          Length = 235

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 84  MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDPF 185
           M  L+   LLAA SAA   +H  ++ PY HH+ P+
Sbjct: 5   MSMLLASSLLAAASAARADHHSPAYAPYPHHHAPW 39


>11_06_0645 -
           25814302-25814759,25814853-25815005,25815032-25815214,
           25815342-25815531,25815624-25815784,25816136-25816623,
           25817035-25817075
          Length = 557

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +1

Query: 301 IINEGRVEGDKYQISIHLPGYEQKDXNVKAKNGVLMVXANSAFNHYLKIQNLP 459
           I ++G++EG +  I  H+P  E  D  V + +   +   +S   H  K  N P
Sbjct: 351 ISSKGQLEGIQVVIDPHVPSVESVDMPVSSMDNSTLEVFSSQQQHSFKCNNTP 403


>04_04_1650 -
           35051728-35051823,35052054-35052162,35052270-35052416,
           35052516-35052637,35052726-35052825,35052895-35053095,
           35053202-35053407,35053778-35053803,35054239-35054327,
           35054427-35054635,35055577-35055672,35055754-35055924
          Length = 523

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 219 HSLWSNLANEMQHLDDM-MKELSLKFPXHYKRRTRGRRQVSDIYSPAWLRTER 374
           H+L +NLA + +   D+ +  L L    HY  +  GR ++ D+    W+  +R
Sbjct: 297 HALETNLAMKAKQYKDLALGHLFLMNNIHYIVKYIGRSELKDLLGADWIERQR 349


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,769,373
Number of Sequences: 37544
Number of extensions: 352559
Number of successful extensions: 980
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)