Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M10
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL359963-3|CAH71093.1|  518|Homo sapiens erythrocyte membrane pr...    31   5.5  
AL358815-3|CAI15130.1|  518|Homo sapiens erythrocyte membrane pr...    31   5.5  
AK000388-1|BAA91133.1|  440|Homo sapiens protein ( Homo sapiens ...    31   5.5  
AF153418-1|AAG43368.1|  504|Homo sapiens FERM-containing protein...    31   5.5  
AB032179-1|BAA96079.2|  518|Homo sapiens EHM2 protein.                 31   5.5  

>AL359963-3|CAH71093.1|  518|Homo sapiens erythrocyte membrane
           protein band 4.1 like 4B protein.
          Length = 518

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 66  FERSTXMIALVLCGLL-AAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLW-SNL 239
           F+ S  +IA  LC      V      YH + H     + P SP VR S  D  S W ++ 
Sbjct: 425 FKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVRPSFQDDRSHWKASA 484

Query: 240 ANEMQHLD 263
           + +  H D
Sbjct: 485 SGDDSHFD 492


>AL358815-3|CAI15130.1|  518|Homo sapiens erythrocyte membrane
           protein band 4.1 like 4B protein.
          Length = 518

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 66  FERSTXMIALVLCGLL-AAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLW-SNL 239
           F+ S  +IA  LC      V      YH + H     + P SP VR S  D  S W ++ 
Sbjct: 425 FKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVRPSFQDDRSHWKASA 484

Query: 240 ANEMQHLD 263
           + +  H D
Sbjct: 485 SGDDSHFD 492


>AK000388-1|BAA91133.1|  440|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20381 fis, clone KAIA2329. ).
          Length = 440

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 66  FERSTXMIALVLCGLL-AAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLW-SNL 239
           F+ S  +IA  LC      V      YH + H     + P SP VR S  D  S W ++ 
Sbjct: 347 FKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVRPSFQDDRSHWKASA 406

Query: 240 ANEMQHLD 263
           + +  H D
Sbjct: 407 SGDDSHFD 414


>AF153418-1|AAG43368.1|  504|Homo sapiens FERM-containing protein
           protein.
          Length = 504

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 66  FERSTXMIALVLCGLL-AAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLW-SNL 239
           F+ S  +IA  LC      V      YH + H     + P SP VR S  D  S W ++ 
Sbjct: 411 FKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVRPSFQDDRSHWKASA 470

Query: 240 ANEMQHLD 263
           + +  H D
Sbjct: 471 SGDDSHFD 478


>AB032179-1|BAA96079.2|  518|Homo sapiens EHM2 protein.
          Length = 518

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 66  FERSTXMIALVLCGLL-AAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLW-SNL 239
           F+ S  +IA  LC      V      YH + H     + P SP VR S  D  S W ++ 
Sbjct: 425 FKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVRPSFQDDRSHWKASA 484

Query: 240 ANEMQHLD 263
           + +  H D
Sbjct: 485 SGDDSHFD 492


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,844,112
Number of Sequences: 237096
Number of extensions: 1971368
Number of successful extensions: 8408
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8408
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)