Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M10
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3419|AAF46866.2|  775|Drosophila melanogaster CG33143-P...    31   2.1  
AY071148-1|AAL48770.1|  431|Drosophila melanogaster RE18101p pro...    30   3.7  
AE014134-2195|AAF53184.2|  431|Drosophila melanogaster CG31764-P...    30   3.7  
AE014134-2194|AAF53185.2|  431|Drosophila melanogaster CG31764-P...    30   3.7  

>AE013599-3419|AAF46866.2|  775|Drosophila melanogaster CG33143-PB,
           isoform B protein.
          Length = 775

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +3

Query: 102 CGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLWSNLANEMQHLDDM 269
           C   AAVSAA  + HG SH       P + YVR   +D  S+    AN ++++D +
Sbjct: 255 CASSAAVSAASSHGHGHSHG-----TPVNTYVRGPSVDNQSIVG--ANVLENVDSL 303


>AY071148-1|AAL48770.1|  431|Drosophila melanogaster RE18101p
           protein.
          Length = 431

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 520 PLKXKQPEDSK-RPVAEPTETTPTNVS 597
           PL+ KQP+D++ R + EP  TTPTN S
Sbjct: 216 PLE-KQPQDNEVRDIDEPKSTTPTNTS 241


>AE014134-2195|AAF53184.2|  431|Drosophila melanogaster CG31764-PB,
           isoform B protein.
          Length = 431

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 520 PLKXKQPEDSK-RPVAEPTETTPTNVS 597
           PL+ KQP+D++ R + EP  TTPTN S
Sbjct: 216 PLE-KQPQDNEVRDIDEPKSTTPTNTS 241


>AE014134-2194|AAF53185.2|  431|Drosophila melanogaster CG31764-PA,
           isoform A protein.
          Length = 431

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 520 PLKXKQPEDSK-RPVAEPTETTPTNVS 597
           PL+ KQP+D++ R + EP  TTPTN S
Sbjct: 216 PLE-KQPQDNEVRDIDEPKSTTPTNTS 241


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,443,045
Number of Sequences: 53049
Number of extensions: 576407
Number of successful extensions: 1827
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)