Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M07
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   6.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.1  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   8.1  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   8.1  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 723 KRHASRREKGGQVSGKRQGRNRRAH 649
           KR  +++ +G + +     +NRRAH
Sbjct: 39  KRPKTKKSQGSRTTHNELEKNRRAH 63


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 583 VRGGETRQDYKDTXRFPLXSSLVRSP 660
           V   ET  ++ DT R P+  SL +SP
Sbjct: 171 VEENETYDEF-DTIRIPIVRSLSKSP 195


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = -2

Query: 272 LNLKHKMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKXIKCS 114
           +N   + + ++VVN+  +     K + S  +  N+     H+S   S+  +CS
Sbjct: 186 INKIEEHDTVLVVNIKKSGNESKKYATSSNSLRNRTHDFQHTSSRYSRERRCS 238


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/53 (22%), Positives = 24/53 (45%)
 Frame = -2

Query: 272 LNLKHKMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKXIKCS 114
           +N   + + ++VVN+  +     K + S  +  N+     H+S   S+   CS
Sbjct: 186 INKIEEQDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCS 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,245
Number of Sequences: 438
Number of extensions: 4391
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)