Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M05
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 147 1e-35
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 141 6e-34
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 105 4e-23
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 99 5e-21
07_03_1329 + 25844335-25845000 29 4.9
04_04_1310 - 32517074-32517193,32517295-32517360,32517468-325175... 28 8.6
01_06_0546 + 30124693-30124970,30125711-30125861,30125955-301261... 28 8.6
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 147 bits (356), Expect = 1e-35
Identities = 74/200 (37%), Positives = 121/200 (60%)
Frame = +2
Query: 203 MSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYY 382
M++ P L A ++P+ DAH SEY+ D RR+++S FTGSAG A++T +AL+WTDGRY+
Sbjct: 21 MAAHSPSLHALVVPSEDAHQSEYVSERDKRRQFVSGFTGSAGLALITMKEALLWTDGRYF 80
Query: 383 TQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEWTPIQTALKK 562
Q E+++ + W LM+ + + P +E W+A NL D V+G++P ++ D + A K
Sbjct: 81 LQAEQQL-TNRWKLMR--MGEDPPVEVWIADNLSDEAVIGINPWCISVDTAQRYEHAFSK 137
Query: 563 ISAQLVPISNNLVDDVRIELGDPAPKRSHNELAPLHVRYTGRTAGEKIAELRRKMAEKKA 742
L +S++LVD E+ P + + V Y G + EK+ ELR K+ +KA
Sbjct: 138 KHQTLFQLSSDLVD----EIWKDRPPVNALPVFVQPVEYAGCSVTEKLKELREKLQHEKA 193
Query: 743 SALVLTALDDIAYTLNLRGS 802
+++ ALD++A+ N+RG+
Sbjct: 194 RGIIIAALDEVAWLYNIRGN 213
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 141 bits (342), Expect = 6e-34
Identities = 77/199 (38%), Positives = 120/199 (60%), Gaps = 3/199 (1%)
Frame = +2
Query: 215 RPVLA--AYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYYTQ 388
RP +A AYI+P+ DAH SE+I RR +++ FTGSAGTAVVT +A +WTDGRY+ Q
Sbjct: 97 RPDVAIDAYIVPSQDAHQSEFIAECFMRRAYLTGFTGSAGTAVVTKDKAALWTDGRYFLQ 156
Query: 389 FEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEWTPIQTALKKIS 568
E+E+ WTLM+ PT +WL L G VG+DP + D ++ A+ + +
Sbjct: 157 AEKELS-HDWTLMRSGNQGVPTTSEWLNEVLPSGCRVGIDPFLFSFDAAEELKDAISEKN 215
Query: 569 AQLVPISN-NLVDDVRIELGDPAPKRSHNELAPLHVRYTGRTAGEKIAELRRKMAEKKAS 745
+LV I + NLVD++ G+ P+ + ++Y G K++ +R ++AE +
Sbjct: 216 HELVLIKDLNLVDEI---WGESRPEPPKEQTRVHGIKYAGVDVPSKLSFVRSQLAENGCN 272
Query: 746 ALVLTALDDIAYTLNLRGS 802
A+V++ LD++A+ LN+RGS
Sbjct: 273 AVVISLLDEVAWLLNMRGS 291
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 105 bits (253), Expect = 4e-23
Identities = 56/158 (35%), Positives = 89/158 (56%)
Frame = +2
Query: 326 GTAVVTSSQALVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGV 505
G A++T +AL+WTDGRY+ Q E+++ W LM+ + + P +E W+A NL D VVG+
Sbjct: 112 GLALITMKEALLWTDGRYFLQAEQQLS-DRWKLMR--MGEDPPVEVWIADNLSDEAVVGI 168
Query: 506 DPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAPLHVRYTG 685
+P ++ D + A K L +S++L+D E+ P + V Y G
Sbjct: 169 NPWCISVDTAQRYEHAFSKKHQTLFQLSSDLID----EIWKDRPSAEALPVFVQPVEYAG 224
Query: 686 RTAGEKIAELRRKMAEKKASALVLTALDDIAYTLNLRG 799
RT EK+ ELR K +KA +++ ALD++A+ N+RG
Sbjct: 225 RTVTEKLKELREKFLHEKARGIIIAALDEVAWLYNIRG 262
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 203 MSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAV--VTSSQALVWTDGR 376
M++ P L A ++P+ DAH SEY+ D RR+++S FTGSA + V ++ W
Sbjct: 17 MAAHSPPLHALVVPSEDAHQSEYVSERDKRRQFVSGFTGSADGTIGWVRVAEVGRWNGRH 76
Query: 377 YYTQFEREV 403
Y + V
Sbjct: 77 VYAMLAKVV 85
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 98.7 bits (235), Expect = 5e-21
Identities = 55/166 (33%), Positives = 94/166 (56%)
Frame = +2
Query: 305 SAFTGSAGTAVVTSSQALVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLK 484
+ FT G A++T +AL+WTDGRY+ Q E+++ W LM + + P +E W+A NL
Sbjct: 89 TTFTIWGGLALITMKEALLWTDGRYFLQAEKQLS-DHWELM--CMGEDPPVEVWIADNLS 145
Query: 485 DGDVVGVDPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAP 664
D V+G++P ++ D + A K L +S++LVD+V D + + P
Sbjct: 146 DEAVIGINPWCISVDTAQRYEHAFSKKHQTLFQLSSDLVDEV---WKDRPLANTQPVVHP 202
Query: 665 LHVRYTGRTAGEKIAELRRKMAEKKASALVLTALDDIAYTLNLRGS 802
V + G + K+ ELR+K+ +KA +++ ALD++A+ N+RG+
Sbjct: 203 --VEFAGCSVTGKLKELRKKLLHEKARGIIIAALDEVAWLYNIRGN 246
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 203 MSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVV 340
M++ P L A ++P+ DAH SEY+ D R ++IS FTG A +AV+
Sbjct: 18 MAAHSPPLHALVVPSDDAHQSEYVAERDKRLQFISGFTGIARSAVL 63
>07_03_1329 + 25844335-25845000
Length = 221
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 458 EKWLASNLKDGDVVGVDPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAP 637
EK L+ +L+ + + +T + +K+ SA+L N++DD R + P P
Sbjct: 81 EKALSDDLEKVSLEAESARMITLESSDGEVVKVKEASARLSKTIGNIIDDGRGDEAIPLP 140
Query: 638 KRSHNELAPLHVRYTGRTAGEK 703
S+ L + V Y + A EK
Sbjct: 141 DVSYKTLKKV-VEYCDKHADEK 161
>04_04_1310 -
32517074-32517193,32517295-32517360,32517468-32517558,
32517741-32517870,32517944-32518032,32518300-32518376,
32518539-32518607,32518800-32518874,32519040-32519135,
32519232-32519396
Length = 325
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 221 VLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTA 334
++AA + PTA+ HN + AA R+W ++ +A
Sbjct: 3 IVAALVAPTANPHNPLRLIAAAPHRQWRRVAAAASSSA 40
>01_06_0546 +
30124693-30124970,30125711-30125861,30125955-30126137,
30126333-30126407,30126535-30126690,30126909-30127007,
30127075-30127205,30127690-30127771,30127846-30128199
Length = 502
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +2
Query: 224 LAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYYTQFEREV 403
+AA I+ T N+ YID ADA +W + S G V+ + T+F++E+
Sbjct: 248 IAAVILGTGS--NAAYIDHADAIPKWHGSLPKS-GNMVINMEWGNFKSSHLPLTEFDQEL 304
Query: 404 DLSAWTLMKQ 433
D + KQ
Sbjct: 305 DAESLNPGKQ 314
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,656,627
Number of Sequences: 37544
Number of extensions: 489549
Number of successful extensions: 1404
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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