Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M05
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidas...   158   6e-39
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ...    93   2e-19
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z82070-6|CAB04910.1|  321|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U20864-8|AAC46665.2|  330|Caenorhabditis elegans Peroxisome asse...    29   5.9  

>AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidase p
           protein 1 protein.
          Length = 616

 Score =  158 bits (383), Expect = 6e-39
 Identities = 82/200 (41%), Positives = 118/200 (59%)
 Frame = +2

Query: 203 MSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYY 382
           ++S +P++A Y++P+ DAH+SEY+   D R +++S F+GS    VVT  +AL+WTDGRY+
Sbjct: 22  LTSSKPMVA-YLLPSTDAHHSEYLADYDFRVKFLSGFSGSNAYVVVTDREALLWTDGRYF 80

Query: 383 TQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEWTPIQTALKK 562
           TQ   ++D ++W LMKQ  PD+ T+  WL   L+ G V+G DP   T D  +     LK 
Sbjct: 81  TQAGNQLDSNSWKLMKQGQPDSITVVDWLVRELERGSVIGFDPTLSTFDAGSKTFKRLKA 140

Query: 563 ISAQLVPISNNLVDDVRIELGDPAPKRSHNELAPLHVRYTGRTAGEKIAELRRKMAEKKA 742
              Q V I  NLVD    E     P+ +   +  L V  TG T  +K+  LR K+ +KK 
Sbjct: 141 AGLQPVSIPGNLVD----EFWTDRPRLAGEPVVVLDVEDTGLTTSKKVENLREKLKQKKC 196

Query: 743 SALVLTALDDIAYTLNLRGS 802
            A V T LDD+ + LN+RGS
Sbjct: 197 DAAVFTLLDDVMWLLNIRGS 216


>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
            protein Y45G5AM.2 protein.
          Length = 1061

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
 Frame = +2

Query: 209  SQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYYTQ 388
            + R  +AAYI+P  DAH +E I    +R ++++ ++G +G A++T ++A+ W D      
Sbjct: 472  TDRTPIAAYILPNTDAHQNELIPDFFSRVQFLNGYSGPSGLAIITLNEAMFWVDNGLLKS 531

Query: 389  FEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEWTPIQTALKKIS 568
             E +VD  +WT+  +       +  WLA  L     VG DP T+    W   Q AL+ ++
Sbjct: 532  AESQVDDRSWTV--KEYQSVEEVINWLAKILPPKSKVGFDP-TLVSYTWH--QQALQSMT 586

Query: 569  A---QLVPISNNLVDDV----RIELGDPAPKRSHN-ELAPLHVRYTGRTAGEKIAELRRK 724
            +   +LV I  N+VD++      + GD       N    P+HV         KI  LR+ 
Sbjct: 587  SDRFELVAIPGNIVDEIWRMRPFQRGDVVKMLDKNTPEIPVHV---------KIDRLRKS 637

Query: 725  MAEKKASALVLTALDDIAYTLNLRGS 802
            +   K  A V+T+L+DI + LN+RG+
Sbjct: 638  LKPNKCLAAVITSLEDIMWLLNIRGN 663


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
 Frame = -1

Query: 510 GSTPTTSPSLRFEASHFSKVGV--SGSVCFIKVHADKSTSLSNCV*Y------LPSVQTR 355
           G+   T PS+ F+ S++ ++G   SGS C I+   D + S   C  Y       P + T 
Sbjct: 96  GTWKWTDPSVTFDYSNW-QLGEPQSGSDCAIQDKGDGTWSAIGCTSYRPYVCVTPVIMTA 154

Query: 354 ACDDVTTAVP 325
            C  +TT +P
Sbjct: 155 TCPPITTPIP 164


>Z82070-6|CAB04910.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.6 protein.
          Length = 321

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
 Frame = -1

Query: 510 GSTPTTSPSLRFEASHFSKVGV--SGSVCFIKVHADKSTSLSNCV*Y------LPSVQTR 355
           G+   T PS+ F+ S++ ++G   SGS C I+   D + S   C  Y       P + T 
Sbjct: 96  GTWKWTDPSVTFDYSNW-QLGEPQSGSDCAIQDKGDGTWSAIGCTSYRPYVCVTPVIMTA 154

Query: 354 ACDDVTTAVP 325
            C  +TT +P
Sbjct: 155 TCPPITTPIP 164


>U20864-8|AAC46665.2|  330|Caenorhabditis elegans Peroxisome
           assembly factor protein13 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
 Frame = +2

Query: 263 SEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYYTQFEREVD-LSAWTLMKQTL 439
           S+ + AA+ +R+W      + G A   ++QAL      +    E+E+  ++  TL     
Sbjct: 218 SQMVQAAEEKRKW------ATGAAPHYTAQALF----DFQASNEQELSFMNGETLRVAPK 267

Query: 440 PDTPTLEKWLASNLKDGDVVGVDPQTMTR 526
            + P +  WL +++ DG  +G+ P    R
Sbjct: 268 EEQPRVRGWLLASVADGSRIGLVPINYVR 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,286,243
Number of Sequences: 27780
Number of extensions: 386689
Number of successful extensions: 1031
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)