Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_M04
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161     69   4e-12
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764...    59   4e-09
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           57   2e-08
11_06_0264 - 21785450-21786928                                         28   9.2  

>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
          Length = 113

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 32/62 (51%), Positives = 46/62 (74%)
 Frame = +2

Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
           LAVLGG   P+A D++  L SVG+EA+ E+L+ +++EL GK +  +IAAGRE  +S+P G
Sbjct: 9   LAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVPSG 68

Query: 281 GG 286
           GG
Sbjct: 69  GG 70


>02_04_0074 -
           19474786-19474812,19475174-19475400,19476362-19476496,
           19478662-19479193
          Length = 306

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 32/81 (39%), Positives = 47/81 (58%)
 Frame = +2

Query: 44  LXFRCXLGLKKCVTWPRXYLAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGK 223
           L F C L   K ++     LA L G   P+A D+   L SVG E D  K++ ++++L GK
Sbjct: 185 LIFFCDLLRMKFIS--AYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGK 242

Query: 224 XVEXLIAAGREXLSSMPVGGG 286
            +  +IA+GRE  +S+P GGG
Sbjct: 243 DITEIIASGREKFASVPCGGG 263


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 26/62 (41%), Positives = 39/62 (62%)
 Frame = +2

Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
           +A L G   P A D+   L SVG E D  K++ ++++++GK +  LIA GRE  +S+P G
Sbjct: 9   MAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREKFASVPSG 68

Query: 281 GG 286
           GG
Sbjct: 69  GG 70


>11_06_0264 - 21785450-21786928
          Length = 492

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 285 PPPTGIDDSXSRPAAISXSTXLPLSSVITFLSFSASASIPTE 160
           PPP  +  + S   AIS +       V  FL  S++A IPTE
Sbjct: 384 PPPPPLATAASTATAISVAGLGGCGDVALFLGKSSAACIPTE 425


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,192,510
Number of Sequences: 37544
Number of extensions: 137210
Number of successful extensions: 297
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)